Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
PrkdcP97313 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
PrkdcP97313 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
PrkdcP97313 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PrkdcP97313 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PrkdcP97313 Gm43313-201ENSMUST00000201398 2235 ntBASIC3.23□□□□□ -1.89
PrkdcP97313 AC112972.2-201ENSMUST00000228702 2210 ntBASIC3.23□□□□□ -1.89
PrkdcP97313 Hmcn2-201ENSMUST00000113532 15646 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
PrkdcP97313 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
PrkdcP97313 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
PrkdcP97313 Gm45697-201ENSMUST00000212893 2876 ntBASIC3.23□□□□□ -1.89
PrkdcP97313 Slc12a6-202ENSMUST00000053666 6060 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PrkdcP97313 Gm22590-201ENSMUST00000104247 128 ntBASIC3.23□□□□□ -1.89
PrkdcP97313 Gm13162-201ENSMUST00000121481 454 ntBASIC3.23□□□□□ -1.89
PrkdcP97313 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC3.23□□□□□ -1.89
PrkdcP97313 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PrkdcP97313 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC3.23□□□□□ -1.89
PrkdcP97313 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC3.23□□□□□ -1.89
PrkdcP97313 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC3.23□□□□□ -1.89
PrkdcP97313 Lsamp-202ENSMUST00000099761 8794 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PrkdcP97313 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PrkdcP97313 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PrkdcP97313 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PrkdcP97313 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
PrkdcP97313 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
PrkdcP97313 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PrkdcP97313 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
PrkdcP97313 Gm37668-201ENSMUST00000193745 1944 ntBASIC3.23□□□□□ -1.89
PrkdcP97313 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
PrkdcP97313 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PrkdcP97313 Cacna1c-209ENSMUST00000187386 6906 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
PrkdcP97313 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC3.23□□□□□ -1.89
PrkdcP97313 Gm10444-201ENSMUST00000126708 148 ntBASIC3.23□□□□□ -1.89
PrkdcP97313 Gm24739-201ENSMUST00000158855 292 ntBASIC3.23□□□□□ -1.89
PrkdcP97313 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
PrkdcP97313 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
PrkdcP97313 Olfr895-201ENSMUST00000093864 951 ntBASIC3.23□□□□□ -1.89
PrkdcP97313 Siglec1-201ENSMUST00000028794 6387 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
PrkdcP97313 Med1-201ENSMUST00000018304 5845 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
PrkdcP97313 Ctnnd1-206ENSMUST00000111675 5089 ntTSL 5 BASIC3.23□□□□□ -1.89
PrkdcP97313 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC3.23□□□□□ -1.89
PrkdcP97313 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC3.23□□□□□ -1.89
PrkdcP97313 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
PrkdcP97313 Gm12149-201ENSMUST00000117511 654 ntBASIC3.23□□□□□ -1.89
PrkdcP97313 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PrkdcP97313 Gm27033-201ENSMUST00000183226 544 ntBASIC3.23□□□□□ -1.89
PrkdcP97313 Gm17781-201ENSMUST00000195232 649 ntBASIC3.23□□□□□ -1.89
PrkdcP97313 Gm44583-201ENSMUST00000207478 281 ntBASIC3.23□□□□□ -1.89
PrkdcP97313 Gm4574-201ENSMUST00000207804 542 ntBASIC3.23□□□□□ -1.89
PrkdcP97313 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC3.23□□□□□ -1.89
PrkdcP97313 AC154241.1-201ENSMUST00000223952 356 ntBASIC3.23□□□□□ -1.89
PrkdcP97313 Abcc1-201ENSMUST00000100167 6792 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PrkdcP97313 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC3.23□□□□□ -1.89
PrkdcP97313 Gm18066-201ENSMUST00000210904 1774 ntBASIC3.23□□□□□ -1.89
PrkdcP97313 Gm43374-201ENSMUST00000202498 2391 ntBASIC3.23□□□□□ -1.89
PrkdcP97313 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PrkdcP97313 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PrkdcP97313 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC3.22□□□□□ -1.89
PrkdcP97313 Naip2-202ENSMUST00000117913 4823 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
PrkdcP97313 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
PrkdcP97313 Ncor1-205ENSMUST00000101067 7243 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
PrkdcP97313 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
PrkdcP97313 Gm12638-201ENSMUST00000119531 298 ntBASIC3.22□□□□□ -1.89
PrkdcP97313 n-R5s48-201ENSMUST00000122482 110 ntBASIC3.22□□□□□ -1.89
PrkdcP97313 Gm25923-201ENSMUST00000158312 138 ntBASIC3.22□□□□□ -1.89
PrkdcP97313 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PrkdcP97313 Gm22897-202ENSMUST00000197782 127 ntBASIC3.22□□□□□ -1.89
PrkdcP97313 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.22□□□□□ -1.89
PrkdcP97313 Gm7786-201ENSMUST00000210494 436 ntBASIC3.22□□□□□ -1.89
PrkdcP97313 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
PrkdcP97313 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PrkdcP97313 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC3.22□□□□□ -1.89
PrkdcP97313 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
PrkdcP97313 Gm37530-201ENSMUST00000191759 4932 ntBASIC3.22□□□□□ -1.89
PrkdcP97313 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
PrkdcP97313 Kcnj15-203ENSMUST00000113855 5128 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PrkdcP97313 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
PrkdcP97313 Wnk1-204ENSMUST00000088646 8364 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
PrkdcP97313 Cacna1d-202ENSMUST00000112250 8688 ntAPPRIS P4 TSL 1 (best) BASIC3.22□□□□□ -1.89
PrkdcP97313 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PrkdcP97313 Fbln5-201ENSMUST00000021603 5829 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PrkdcP97313 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PrkdcP97313 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
PrkdcP97313 Vmn2r-ps96-201ENSMUST00000221218 2545 ntBASIC3.22□□□□□ -1.89
PrkdcP97313 AC165260.6-205ENSMUST00000224190 9762 ntBASIC3.22□□□□□ -1.89
PrkdcP97313 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
PrkdcP97313 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC3.22□□□□□ -1.89
PrkdcP97313 Gm4487-201ENSMUST00000150617 442 ntBASIC3.22□□□□□ -1.89
PrkdcP97313 Gm24239-201ENSMUST00000157791 255 ntBASIC3.22□□□□□ -1.89
PrkdcP97313 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC3.22□□□□□ -1.89
PrkdcP97313 Gm42983-201ENSMUST00000199879 815 ntBASIC3.22□□□□□ -1.89
PrkdcP97313 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
PrkdcP97313 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PrkdcP97313 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
PrkdcP97313 Gm37775-201ENSMUST00000194120 2313 ntBASIC3.22□□□□□ -1.89
PrkdcP97313 Myo15-201ENSMUST00000071880 11769 ntAPPRIS P4 TSL 5 BASIC3.22□□□□□ -1.89
PrkdcP97313 Gm37057-201ENSMUST00000192624 1916 ntBASIC3.22□□□□□ -1.89
PrkdcP97313 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PrkdcP97313 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC3.22□□□□□ -1.89
PrkdcP97313 AC159193.1-201ENSMUST00000222872 2517 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 91.5 ms