Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm15087-201ENSMUST00000117465 1172 ntBASIC6.4□□□□□ -1.38
Sox1P53783 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC6.4□□□□□ -1.38
Sox1P53783 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC6.4□□□□□ -1.38
Sox1P53783 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC6.4□□□□□ -1.38
Sox1P53783 Gm8595-201ENSMUST00000118250 630 ntBASIC6.4□□□□□ -1.38
Sox1P53783 Gm14783-201ENSMUST00000118900 663 ntBASIC6.4□□□□□ -1.38
Sox1P53783 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC6.4□□□□□ -1.38
Sox1P53783 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Sox1P53783 Gm22434-201ENSMUST00000158549 122 ntBASIC6.4□□□□□ -1.38
Sox1P53783 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
Sox1P53783 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Sox1P53783 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC6.4□□□□□ -1.38
Sox1P53783 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Sox1P53783 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC6.4□□□□□ -1.38
Sox1P53783 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Sox1P53783 Gm4076-201ENSMUST00000179230 965 ntBASIC6.4□□□□□ -1.38
Sox1P53783 Gm21850-201ENSMUST00000179792 359 ntBASIC6.4□□□□□ -1.38
Sox1P53783 Gm27313-201ENSMUST00000183500 142 ntBASIC6.4□□□□□ -1.38
Sox1P53783 Gm28188-201ENSMUST00000190483 236 ntBASIC6.4□□□□□ -1.38
Sox1P53783 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC6.4□□□□□ -1.38
Sox1P53783 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Sox1P53783 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC6.4□□□□□ -1.38
Sox1P53783 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
Sox1P53783 Gm17991-201ENSMUST00000208139 297 ntBASIC6.4□□□□□ -1.38
Sox1P53783 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Sox1P53783 AC108846.4-201ENSMUST00000216783 341 ntBASIC6.4□□□□□ -1.38
Sox1P53783 AC132384.9-201ENSMUST00000218085 277 ntBASIC6.4□□□□□ -1.38
Sox1P53783 AC167222.2-201ENSMUST00000220014 295 ntBASIC6.4□□□□□ -1.38
Sox1P53783 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC6.4□□□□□ -1.38
Sox1P53783 AC159263.3-201ENSMUST00000223434 460 ntBASIC6.4□□□□□ -1.38
Sox1P53783 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC6.4□□□□□ -1.38
Sox1P53783 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Sox1P53783 CT009757.6-201ENSMUST00000220661 2312 ntBASIC6.4□□□□□ -1.38
Sox1P53783 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC6.4□□□□□ -1.38
Sox1P53783 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Sox1P53783 AC129308.2-203ENSMUST00000224109 2385 ntBASIC6.4□□□□□ -1.39
Sox1P53783 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Sox1P53783 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC6.4□□□□□ -1.39
Sox1P53783 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
Sox1P53783 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Sox1P53783 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Sox1P53783 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC6.4□□□□□ -1.39
Sox1P53783 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.39
Sox1P53783 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Sox1P53783 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Sox1P53783 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC6.4□□□□□ -1.39
Sox1P53783 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Sox1P53783 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Sox1P53783 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Sox1P53783 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC6.4□□□□□ -1.39
Sox1P53783 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC6.4□□□□□ -1.39
Sox1P53783 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Sox1P53783 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Sox1P53783 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
Sox1P53783 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Sox1P53783 Gm13854-201ENSMUST00000121183 1679 ntBASIC6.39□□□□□ -1.39
Sox1P53783 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sox1P53783 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC6.39□□□□□ -1.39
Sox1P53783 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sox1P53783 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Sox1P53783 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sox1P53783 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Sox1P53783 Gm44416-201ENSMUST00000204055 2066 ntBASIC6.39□□□□□ -1.39
Sox1P53783 Gm15901-201ENSMUST00000117663 941 ntBASIC6.39□□□□□ -1.39
Sox1P53783 Gm12985-201ENSMUST00000118376 183 ntBASIC6.39□□□□□ -1.39
Sox1P53783 Gm14871-201ENSMUST00000119056 194 ntBASIC6.39□□□□□ -1.39
Sox1P53783 Gm9078-201ENSMUST00000119126 617 ntBASIC6.39□□□□□ -1.39
Sox1P53783 Gm14785-201ENSMUST00000120185 539 ntBASIC6.39□□□□□ -1.39
Sox1P53783 Gm12578-201ENSMUST00000121244 417 ntBASIC6.39□□□□□ -1.39
Sox1P53783 Gm14970-201ENSMUST00000122289 355 ntBASIC6.39□□□□□ -1.39
Sox1P53783 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC6.39□□□□□ -1.39
Sox1P53783 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sox1P53783 Gm22076-201ENSMUST00000158601 84 ntBASIC6.39□□□□□ -1.39
Sox1P53783 Gm17054-201ENSMUST00000169811 259 ntBASIC6.39□□□□□ -1.39
Sox1P53783 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC6.39□□□□□ -1.39
Sox1P53783 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC6.39□□□□□ -1.39
Sox1P53783 Gm25397-201ENSMUST00000176951 92 ntBASIC6.39□□□□□ -1.39
Sox1P53783 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sox1P53783 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC6.39□□□□□ -1.39
Sox1P53783 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC6.39□□□□□ -1.39
Sox1P53783 Gm37501-201ENSMUST00000192830 691 ntBASIC6.39□□□□□ -1.39
Sox1P53783 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC6.39□□□□□ -1.39
Sox1P53783 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC6.39□□□□□ -1.39
Sox1P53783 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC6.39□□□□□ -1.39
Sox1P53783 Gm6070-201ENSMUST00000207275 419 ntBASIC6.39□□□□□ -1.39
Sox1P53783 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC6.39□□□□□ -1.39
Sox1P53783 Gm45427-201ENSMUST00000209572 1253 ntBASIC6.39□□□□□ -1.39
Sox1P53783 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sox1P53783 Gm45249-201ENSMUST00000211021 348 ntBASIC6.39□□□□□ -1.39
Sox1P53783 Gm17999-201ENSMUST00000211568 542 ntBASIC6.39□□□□□ -1.39
Sox1P53783 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC6.39□□□□□ -1.39
Sox1P53783 Gm46994-201ENSMUST00000221523 219 ntBASIC6.39□□□□□ -1.39
Sox1P53783 AC163660.1-201ENSMUST00000223696 818 ntBASIC6.39□□□□□ -1.39
Sox1P53783 CT573085.1-201ENSMUST00000224279 1197 ntBASIC6.39□□□□□ -1.39
Sox1P53783 AC154576.2-203ENSMUST00000224736 253 ntBASIC6.39□□□□□ -1.39
Sox1P53783 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sox1P53783 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Sox1P53783 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Sox1P53783 Gm9403-201ENSMUST00000196299 2181 ntBASIC6.39□□□□□ -1.39
Sox1P53783 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms