Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC5.86□□□□□ -1.47
Shmt1P50431 AC161609.1-201ENSMUST00000225878 474 ntBASIC5.86□□□□□ -1.47
Shmt1P50431 AC140393.2-201ENSMUST00000226894 943 ntBASIC5.86□□□□□ -1.47
Shmt1P50431 AC161383.1-201ENSMUST00000227356 527 ntBASIC5.86□□□□□ -1.47
Shmt1P50431 AC107453.2-201ENSMUST00000227714 655 ntBASIC5.86□□□□□ -1.47
Shmt1P50431 AC156016.5-201ENSMUST00000228742 355 ntBASIC5.86□□□□□ -1.47
Shmt1P50431 Gm10064-201ENSMUST00000071235 399 ntBASIC5.86□□□□□ -1.47
Shmt1P50431 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC5.86□□□□□ -1.47
Shmt1P50431 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
Shmt1P50431 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Shmt1P50431 Mir188-201ENSMUST00000083464 68 ntBASIC5.86□□□□□ -1.47
Shmt1P50431 Mir133b-201ENSMUST00000083546 119 ntBASIC5.86□□□□□ -1.47
Shmt1P50431 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Shmt1P50431 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Shmt1P50431 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Shmt1P50431 Olfr1134-201ENSMUST00000099857 1102 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
Shmt1P50431 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Shmt1P50431 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
Shmt1P50431 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
Shmt1P50431 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Shmt1P50431 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC5.86□□□□□ -1.47
Shmt1P50431 Gm6818-201ENSMUST00000190556 2558 ntBASIC5.86□□□□□ -1.47
Shmt1P50431 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Shmt1P50431 Gm37846-201ENSMUST00000191840 3774 ntBASIC5.86□□□□□ -1.47
Shmt1P50431 AC112972.2-201ENSMUST00000228702 2210 ntBASIC5.86□□□□□ -1.47
Shmt1P50431 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Shmt1P50431 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Shmt1P50431 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Shmt1P50431 Gm37056-201ENSMUST00000192141 1865 ntBASIC5.85□□□□□ -1.47
Shmt1P50431 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Shmt1P50431 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Shmt1P50431 Gm43485-201ENSMUST00000199292 1710 ntBASIC5.85□□□□□ -1.47
Shmt1P50431 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Shmt1P50431 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Shmt1P50431 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Shmt1P50431 Gm38387-201ENSMUST00000191945 2577 ntBASIC5.85□□□□□ -1.47
Shmt1P50431 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC5.85□□□□□ -1.47
Shmt1P50431 AC112142.1-203ENSMUST00000228670 2472 ntBASIC5.85□□□□□ -1.47
Shmt1P50431 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
Shmt1P50431 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC5.85□□□□□ -1.47
Shmt1P50431 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Shmt1P50431 Mir582-201ENSMUST00000103758 81 ntBASIC5.85□□□□□ -1.47
Shmt1P50431 Gm25422-201ENSMUST00000104219 129 ntBASIC5.85□□□□□ -1.47
Shmt1P50431 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Shmt1P50431 Gm14472-201ENSMUST00000119815 282 ntBASIC5.85□□□□□ -1.47
Shmt1P50431 Atf1-ps-201ENSMUST00000120608 810 ntBASIC5.85□□□□□ -1.47
Shmt1P50431 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Shmt1P50431 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Shmt1P50431 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Shmt1P50431 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC5.85□□□□□ -1.47
Shmt1P50431 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC5.85□□□□□ -1.47
Shmt1P50431 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Shmt1P50431 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Shmt1P50431 Gm26086-201ENSMUST00000157902 263 ntBASIC5.85□□□□□ -1.47
Shmt1P50431 Gm24940-201ENSMUST00000158326 108 ntBASIC5.85□□□□□ -1.47
Shmt1P50431 Gm6872-201ENSMUST00000165001 700 ntBASIC5.85□□□□□ -1.47
Shmt1P50431 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
Shmt1P50431 Gm18560-201ENSMUST00000173463 1123 ntBASIC5.85□□□□□ -1.47
Shmt1P50431 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Shmt1P50431 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Shmt1P50431 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Shmt1P50431 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Shmt1P50431 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Shmt1P50431 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Shmt1P50431 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Shmt1P50431 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Shmt1P50431 Gm27148-201ENSMUST00000185086 160 ntBASIC5.85□□□□□ -1.47
Shmt1P50431 Gm28871-201ENSMUST00000186191 687 ntBASIC5.85□□□□□ -1.47
Shmt1P50431 Gm29284-201ENSMUST00000188363 255 ntBASIC5.85□□□□□ -1.47
Shmt1P50431 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC5.85□□□□□ -1.47
Shmt1P50431 Gm37966-201ENSMUST00000193122 326 ntBASIC5.85□□□□□ -1.47
Shmt1P50431 Igkv4-56-201ENSMUST00000198436 349 ntBASIC5.85□□□□□ -1.47
Shmt1P50431 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Shmt1P50431 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC5.85□□□□□ -1.47
Shmt1P50431 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Shmt1P50431 Gm6362-201ENSMUST00000217686 836 ntBASIC5.85□□□□□ -1.47
Shmt1P50431 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC5.85□□□□□ -1.47
Shmt1P50431 AC166323.1-201ENSMUST00000217756 367 ntBASIC5.85□□□□□ -1.47
Shmt1P50431 AC110380.1-201ENSMUST00000226987 389 ntBASIC5.85□□□□□ -1.47
Shmt1P50431 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Shmt1P50431 Mir465-201ENSMUST00000093563 74 ntBASIC5.85□□□□□ -1.47
Shmt1P50431 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Shmt1P50431 Gm20644-201ENSMUST00000176721 2063 ntBASIC5.85□□□□□ -1.47
Shmt1P50431 Gm43682-201ENSMUST00000202150 2090 ntBASIC5.85□□□□□ -1.47
Shmt1P50431 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Shmt1P50431 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Shmt1P50431 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC5.85□□□□□ -1.47
Shmt1P50431 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC5.85□□□□□ -1.47
Shmt1P50431 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Shmt1P50431 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Shmt1P50431 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Shmt1P50431 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Shmt1P50431 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Shmt1P50431 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Shmt1P50431 AC163731.1-201ENSMUST00000225696 3118 ntBASIC5.85□□□□□ -1.47
Shmt1P50431 AC162936.1-201ENSMUST00000223676 2368 ntBASIC5.85□□□□□ -1.47
Shmt1P50431 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Shmt1P50431 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Shmt1P50431 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Shmt1P50431 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms