Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 CT025680.1-201ENSMUST00000217375 375 ntBASIC7.15□□□□□ -1.26
Rfx1P48377 AC165349.1-201ENSMUST00000217896 424 ntBASIC7.15□□□□□ -1.26
Rfx1P48377 AC124732.4-201ENSMUST00000220930 1274 ntBASIC7.15□□□□□ -1.26
Rfx1P48377 AC165283.1-201ENSMUST00000223390 307 ntBASIC7.15□□□□□ -1.26
Rfx1P48377 AC123061.2-201ENSMUST00000226234 802 ntBASIC7.15□□□□□ -1.26
Rfx1P48377 AC154323.2-201ENSMUST00000226557 1151 ntBASIC7.15□□□□□ -1.26
Rfx1P48377 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Rfx1P48377 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC7.15□□□□□ -1.26
Rfx1P48377 Gm23054-201ENSMUST00000082804 162 ntBASIC7.15□□□□□ -1.26
Rfx1P48377 Mir412-201ENSMUST00000083636 80 ntBASIC7.15□□□□□ -1.26
Rfx1P48377 Gm6990-201ENSMUST00000086830 348 ntBASIC7.15□□□□□ -1.26
Rfx1P48377 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Rfx1P48377 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Rfx1P48377 AC102431.1-201ENSMUST00000223773 1449 ntBASIC7.15□□□□□ -1.27
Rfx1P48377 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.27
Rfx1P48377 Gm43577-201ENSMUST00000197090 3344 ntBASIC7.15□□□□□ -1.27
Rfx1P48377 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
Rfx1P48377 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
Rfx1P48377 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Rfx1P48377 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Rfx1P48377 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC7.14□□□□□ -1.27
Rfx1P48377 CT025604.1-201ENSMUST00000221111 3436 ntBASIC7.14□□□□□ -1.27
Rfx1P48377 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Rfx1P48377 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Rfx1P48377 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Rfx1P48377 Gm23431-201ENSMUST00000104006 107 ntBASIC7.14□□□□□ -1.27
Rfx1P48377 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Rfx1P48377 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
Rfx1P48377 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Rfx1P48377 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Rfx1P48377 Llph-ps2-201ENSMUST00000122000 393 ntBASIC7.14□□□□□ -1.27
Rfx1P48377 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Rfx1P48377 Gm22733-201ENSMUST00000158094 91 ntBASIC7.14□□□□□ -1.27
Rfx1P48377 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC7.14□□□□□ -1.27
Rfx1P48377 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC7.14□□□□□ -1.27
Rfx1P48377 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Rfx1P48377 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Rfx1P48377 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Rfx1P48377 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Rfx1P48377 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Rfx1P48377 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Rfx1P48377 Mir6987-201ENSMUST00000184789 73 ntBASIC7.14□□□□□ -1.27
Rfx1P48377 Gm21877-201ENSMUST00000185640 694 ntBASIC7.14□□□□□ -1.27
Rfx1P48377 Gm7654-201ENSMUST00000186738 683 ntBASIC7.14□□□□□ -1.27
Rfx1P48377 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC7.14□□□□□ -1.27
Rfx1P48377 Gm42805-201ENSMUST00000196158 276 ntBASIC7.14□□□□□ -1.27
Rfx1P48377 Gm43743-202ENSMUST00000198353 491 ntBASIC7.14□□□□□ -1.27
Rfx1P48377 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC7.14□□□□□ -1.27
Rfx1P48377 Gm45192-201ENSMUST00000206749 283 ntBASIC7.14□□□□□ -1.27
Rfx1P48377 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC7.14□□□□□ -1.27
Rfx1P48377 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC7.14□□□□□ -1.27
Rfx1P48377 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Rfx1P48377 AC154642.1-201ENSMUST00000224173 740 ntBASIC7.14□□□□□ -1.27
Rfx1P48377 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Rfx1P48377 AC124746.1-201ENSMUST00000227535 1300 ntBASIC7.14□□□□□ -1.27
Rfx1P48377 AC154618.2-201ENSMUST00000228299 452 ntBASIC7.14□□□□□ -1.27
Rfx1P48377 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
Rfx1P48377 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Rfx1P48377 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
Rfx1P48377 AC154627.2-201ENSMUST00000227028 4669 ntBASIC7.14□□□□□ -1.27
Rfx1P48377 Gm37762-201ENSMUST00000194515 3561 ntBASIC7.14□□□□□ -1.27
Rfx1P48377 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
Rfx1P48377 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Rfx1P48377 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Rfx1P48377 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Rfx1P48377 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Rfx1P48377 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC7.13□□□□□ -1.27
Rfx1P48377 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Rfx1P48377 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Rfx1P48377 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
Rfx1P48377 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Rfx1P48377 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Rfx1P48377 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Rfx1P48377 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC7.13□□□□□ -1.27
Rfx1P48377 Gm11799-201ENSMUST00000116110 460 ntBASIC7.13□□□□□ -1.27
Rfx1P48377 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC7.13□□□□□ -1.27
Rfx1P48377 Gm15216-201ENSMUST00000118058 277 ntBASIC7.13□□□□□ -1.27
Rfx1P48377 Gm9005-201ENSMUST00000119908 607 ntBASIC7.13□□□□□ -1.27
Rfx1P48377 Gm13865-201ENSMUST00000120957 865 ntBASIC7.13□□□□□ -1.27
Rfx1P48377 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Rfx1P48377 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC7.13□□□□□ -1.27
Rfx1P48377 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC7.13□□□□□ -1.27
Rfx1P48377 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC7.13□□□□□ -1.27
Rfx1P48377 Gm7613-201ENSMUST00000139070 487 ntBASIC7.13□□□□□ -1.27
Rfx1P48377 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC7.13□□□□□ -1.27
Rfx1P48377 Gm25553-201ENSMUST00000158076 79 ntBASIC7.13□□□□□ -1.27
Rfx1P48377 Gm24724-201ENSMUST00000158230 107 ntBASIC7.13□□□□□ -1.27
Rfx1P48377 Gm23762-201ENSMUST00000158348 106 ntBASIC7.13□□□□□ -1.27
Rfx1P48377 Gm16269-201ENSMUST00000160532 409 ntBASIC7.13□□□□□ -1.27
Rfx1P48377 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC7.13□□□□□ -1.27
Rfx1P48377 Gm7438-201ENSMUST00000177664 639 ntBASIC7.13□□□□□ -1.27
Rfx1P48377 Gm7408-201ENSMUST00000178014 639 ntBASIC7.13□□□□□ -1.27
Rfx1P48377 Gm7386-201ENSMUST00000178020 639 ntBASIC7.13□□□□□ -1.27
Rfx1P48377 Gm3657-201ENSMUST00000178170 639 ntBASIC7.13□□□□□ -1.27
Rfx1P48377 Gm7415-201ENSMUST00000178205 639 ntBASIC7.13□□□□□ -1.27
Rfx1P48377 Gm7391-201ENSMUST00000178680 639 ntBASIC7.13□□□□□ -1.27
Rfx1P48377 Gm21758-201ENSMUST00000179336 819 ntBASIC7.13□□□□□ -1.27
Rfx1P48377 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Rfx1P48377 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC7.13□□□□□ -1.27
Rfx1P48377 Gm29647-201ENSMUST00000188795 666 ntBASIC7.13□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms