Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm19131-201ENSMUST00000203408 789 ntBASIC7.05□□□□□ -1.28
Col18a1P39061 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC7.05□□□□□ -1.28
Col18a1P39061 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Col18a1P39061 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC7.05□□□□□ -1.28
Col18a1P39061 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Col18a1P39061 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC7.05□□□□□ -1.28
Col18a1P39061 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC7.05□□□□□ -1.28
Col18a1P39061 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Col18a1P39061 AC115735.3-201ENSMUST00000227757 513 ntBASIC7.05□□□□□ -1.28
Col18a1P39061 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Col18a1P39061 Olfr881-201ENSMUST00000074611 948 ntBASIC7.05□□□□□ -1.28
Col18a1P39061 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col18a1P39061 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC7.05□□□□□ -1.28
Col18a1P39061 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Col18a1P39061 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Col18a1P39061 Gm37278-201ENSMUST00000191619 2872 ntBASIC7.05□□□□□ -1.28
Col18a1P39061 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Col18a1P39061 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Col18a1P39061 Nlgn3-202ENSMUST00000118111 8004 ntTSL 5 BASIC7.05□□□□□ -1.28
Col18a1P39061 Gm44901-201ENSMUST00000208157 3977 ntBASIC7.05□□□□□ -1.28
Col18a1P39061 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col18a1P39061 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col18a1P39061 Greb1-212ENSMUST00000162112 8058 ntAPPRIS P3 TSL 5 BASIC7.05□□□□□ -1.28
Col18a1P39061 AC154329.1-201ENSMUST00000224408 3129 ntBASIC7.05□□□□□ -1.28
Col18a1P39061 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Col18a1P39061 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC7.05□□□□□ -1.28
Col18a1P39061 Gm11914-201ENSMUST00000117094 507 ntBASIC7.05□□□□□ -1.28
Col18a1P39061 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC7.05□□□□□ -1.28
Col18a1P39061 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC7.05□□□□□ -1.28
Col18a1P39061 Gm6884-201ENSMUST00000119318 615 ntBASIC7.05□□□□□ -1.28
Col18a1P39061 Gm15828-201ENSMUST00000119911 522 ntBASIC7.05□□□□□ -1.28
Col18a1P39061 Gm13808-201ENSMUST00000121353 184 ntBASIC7.05□□□□□ -1.28
Col18a1P39061 Gm14903-201ENSMUST00000122435 537 ntBASIC7.05□□□□□ -1.28
Col18a1P39061 Gm22613-201ENSMUST00000122679 292 ntBASIC7.05□□□□□ -1.28
Col18a1P39061 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Col18a1P39061 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Col18a1P39061 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC7.05□□□□□ -1.28
Col18a1P39061 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC7.05□□□□□ -1.28
Col18a1P39061 Gm21909-201ENSMUST00000178260 439 ntBASIC7.05□□□□□ -1.28
Col18a1P39061 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC7.05□□□□□ -1.28
Col18a1P39061 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC7.05□□□□□ -1.28
Col18a1P39061 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC7.05□□□□□ -1.28
Col18a1P39061 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC7.05□□□□□ -1.28
Col18a1P39061 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC7.05□□□□□ -1.28
Col18a1P39061 Gm34015-201ENSMUST00000194908 451 ntBASIC7.05□□□□□ -1.28
Col18a1P39061 Gm43578-201ENSMUST00000201250 459 ntBASIC7.05□□□□□ -1.28
Col18a1P39061 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC7.05□□□□□ -1.28
Col18a1P39061 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Col18a1P39061 AC156560.1-201ENSMUST00000221425 256 ntBASIC7.05□□□□□ -1.28
Col18a1P39061 AC117814.1-201ENSMUST00000226135 352 ntBASIC7.05□□□□□ -1.28
Col18a1P39061 AC102815.1-201ENSMUST00000226662 1061 ntBASIC7.05□□□□□ -1.28
Col18a1P39061 AC116656.1-201ENSMUST00000227040 755 ntBASIC7.05□□□□□ -1.28
Col18a1P39061 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
Col18a1P39061 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col18a1P39061 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC7.05□□□□□ -1.28
Col18a1P39061 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Col18a1P39061 Mycbp2-201ENSMUST00000159855 15233 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col18a1P39061 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC7.04□□□□□ -1.28
Col18a1P39061 AC123705.3-201ENSMUST00000223531 2069 ntBASIC7.04□□□□□ -1.28
Col18a1P39061 Abcc1-201ENSMUST00000100167 6792 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col18a1P39061 Gm37400-201ENSMUST00000193148 3605 ntBASIC7.04□□□□□ -1.28
Col18a1P39061 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC7.04□□□□□ -1.28
Col18a1P39061 Alcam-207ENSMUST00000170035 1917 ntTSL 5 BASIC7.04□□□□□ -1.28
Col18a1P39061 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col18a1P39061 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col18a1P39061 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col18a1P39061 Gm25726-201ENSMUST00000104529 129 ntBASIC7.04□□□□□ -1.28
Col18a1P39061 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col18a1P39061 Gm14982-201ENSMUST00000121102 442 ntBASIC7.04□□□□□ -1.28
Col18a1P39061 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
Col18a1P39061 Gm17081-201ENSMUST00000167363 478 ntBASIC7.04□□□□□ -1.28
Col18a1P39061 Gm27528-201ENSMUST00000183544 205 ntBASIC7.04□□□□□ -1.28
Col18a1P39061 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC7.04□□□□□ -1.28
Col18a1P39061 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC7.04□□□□□ -1.28
Col18a1P39061 Gm18183-201ENSMUST00000191024 615 ntBASIC7.04□□□□□ -1.28
Col18a1P39061 Gm37578-201ENSMUST00000192256 1177 ntBASIC7.04□□□□□ -1.28
Col18a1P39061 Gm5027-201ENSMUST00000206700 375 ntBASIC7.04□□□□□ -1.28
Col18a1P39061 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col18a1P39061 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Col18a1P39061 Gm23058-201ENSMUST00000093703 107 ntBASIC7.04□□□□□ -1.28
Col18a1P39061 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Col18a1P39061 Gm43961-201ENSMUST00000203289 1872 ntBASIC7.04□□□□□ -1.28
Col18a1P39061 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC7.04□□□□□ -1.28
Col18a1P39061 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col18a1P39061 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col18a1P39061 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Col18a1P39061 Mtf1-201ENSMUST00000030723 7631 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col18a1P39061 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
Col18a1P39061 AC112972.2-201ENSMUST00000228702 2210 ntBASIC7.03□□□□□ -1.28
Col18a1P39061 Pkd1l1-203ENSMUST00000178195 6213 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Col18a1P39061 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC7.03□□□□□ -1.28
Col18a1P39061 Mettl16-205ENSMUST00000141755 12584 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col18a1P39061 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col18a1P39061 Gm45786-201ENSMUST00000213021 2278 ntBASIC7.03□□□□□ -1.28
Col18a1P39061 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col18a1P39061 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Col18a1P39061 Mir546-201ENSMUST00000102105 121 ntBASIC7.03□□□□□ -1.28
Col18a1P39061 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC7.03□□□□□ -1.28
Col18a1P39061 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col18a1P39061 Gm15010-201ENSMUST00000117153 407 ntBASIC7.03□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms