Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 AC110816.1-201ENSMUST00000218559 980 ntBASIC4□□□□□ -1.77
Sdc1P18828 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC4□□□□□ -1.77
Sdc1P18828 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC4□□□□□ -1.77
Sdc1P18828 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC4□□□□□ -1.77
Sdc1P18828 Snora52-201ENSMUST00000082732 137 ntBASIC4□□□□□ -1.77
Sdc1P18828 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC4□□□□□ -1.77
Sdc1P18828 Gm37735-201ENSMUST00000193995 1406 ntBASIC4□□□□□ -1.77
Sdc1P18828 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC4□□□□□ -1.77
Sdc1P18828 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Sdc1P18828 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Sdc1P18828 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC4□□□□□ -1.77
Sdc1P18828 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
Sdc1P18828 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC4□□□□□ -1.77
Sdc1P18828 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC4□□□□□ -1.77
Sdc1P18828 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
Sdc1P18828 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC4□□□□□ -1.77
Sdc1P18828 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Sdc1P18828 Gm37899-201ENSMUST00000193116 8717 ntBASIC3.99□□□□□ -1.77
Sdc1P18828 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Sdc1P18828 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC3.99□□□□□ -1.77
Sdc1P18828 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Sdc1P18828 Mir700-201ENSMUST00000102169 79 ntBASIC3.99□□□□□ -1.77
Sdc1P18828 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC3.99□□□□□ -1.77
Sdc1P18828 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Sdc1P18828 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Sdc1P18828 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC3.99□□□□□ -1.77
Sdc1P18828 Gm12439-201ENSMUST00000117162 365 ntBASIC3.99□□□□□ -1.77
Sdc1P18828 Gm14621-201ENSMUST00000117709 689 ntBASIC3.99□□□□□ -1.77
Sdc1P18828 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC3.99□□□□□ -1.77
Sdc1P18828 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC3.99□□□□□ -1.77
Sdc1P18828 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Sdc1P18828 Gm22596-201ENSMUST00000157601 316 ntBASIC3.99□□□□□ -1.77
Sdc1P18828 Mir1953-201ENSMUST00000157866 89 ntBASIC3.99□□□□□ -1.77
Sdc1P18828 Gm24682-201ENSMUST00000158764 137 ntBASIC3.99□□□□□ -1.77
Sdc1P18828 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Sdc1P18828 Gm27225-201ENSMUST00000183833 557 ntBASIC3.99□□□□□ -1.77
Sdc1P18828 Gm28060-201ENSMUST00000191554 189 ntBASIC3.99□□□□□ -1.77
Sdc1P18828 Gm38334-201ENSMUST00000195060 313 ntBASIC3.99□□□□□ -1.77
Sdc1P18828 Gm5694-201ENSMUST00000195648 641 ntBASIC3.99□□□□□ -1.77
Sdc1P18828 Gm22711-202ENSMUST00000197029 135 ntBASIC3.99□□□□□ -1.77
Sdc1P18828 Ighv1-73-201ENSMUST00000197435 352 ntBASIC3.99□□□□□ -1.77
Sdc1P18828 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Sdc1P18828 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC3.99□□□□□ -1.77
Sdc1P18828 Gm43005-201ENSMUST00000199015 648 ntBASIC3.99□□□□□ -1.77
Sdc1P18828 Gm43215-201ENSMUST00000199108 252 ntBASIC3.99□□□□□ -1.77
Sdc1P18828 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC3.99□□□□□ -1.77
Sdc1P18828 Gm36371-201ENSMUST00000209043 1103 ntBASIC3.99□□□□□ -1.77
Sdc1P18828 Gm7351-201ENSMUST00000210745 580 ntBASIC3.99□□□□□ -1.77
Sdc1P18828 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC3.99□□□□□ -1.77
Sdc1P18828 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC3.99□□□□□ -1.77
Sdc1P18828 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC3.99□□□□□ -1.77
Sdc1P18828 CT025579.3-201ENSMUST00000224543 451 ntBASIC3.99□□□□□ -1.77
Sdc1P18828 CT009600.2-201ENSMUST00000226638 481 ntBASIC3.99□□□□□ -1.77
Sdc1P18828 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Sdc1P18828 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Sdc1P18828 Gm8724-201ENSMUST00000081668 483 ntBASIC3.99□□□□□ -1.77
Sdc1P18828 Gm6177-201ENSMUST00000085589 465 ntBASIC3.99□□□□□ -1.77
Sdc1P18828 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Sdc1P18828 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Sdc1P18828 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
Sdc1P18828 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Sdc1P18828 Gm37747-201ENSMUST00000193717 4003 ntBASIC3.99□□□□□ -1.77
Sdc1P18828 Gm15304-201ENSMUST00000122150 2640 ntBASIC3.99□□□□□ -1.77
Sdc1P18828 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Sdc1P18828 Olfr1472-202ENSMUST00000096201 1377 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Sdc1P18828 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Sdc1P18828 AC160130.1-201ENSMUST00000220734 2735 ntBASIC3.99□□□□□ -1.77
Sdc1P18828 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Sdc1P18828 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Sdc1P18828 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Sdc1P18828 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Sdc1P18828 Svs2-202ENSMUST00000109374 1479 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Sdc1P18828 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Sdc1P18828 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Sdc1P18828 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC3.98□□□□□ -1.77
Sdc1P18828 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Sdc1P18828 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Sdc1P18828 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Sdc1P18828 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC3.98□□□□□ -1.77
Sdc1P18828 Gm9519-201ENSMUST00000206108 1337 ntBASIC3.98□□□□□ -1.77
Sdc1P18828 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC3.98□□□□□ -1.77
Sdc1P18828 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Sdc1P18828 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC3.98□□□□□ -1.77
Sdc1P18828 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Sdc1P18828 Gm44321-201ENSMUST00000204262 2855 ntBASIC3.98□□□□□ -1.77
Sdc1P18828 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Sdc1P18828 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Sdc1P18828 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Sdc1P18828 Gm10552-201ENSMUST00000113396 372 ntBASIC3.98□□□□□ -1.77
Sdc1P18828 Mup-ps21-201ENSMUST00000119998 448 ntBASIC3.98□□□□□ -1.77
Sdc1P18828 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC3.98□□□□□ -1.77
Sdc1P18828 Gm11965-201ENSMUST00000122017 277 ntBASIC3.98□□□□□ -1.77
Sdc1P18828 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC3.98□□□□□ -1.77
Sdc1P18828 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Sdc1P18828 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Sdc1P18828 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC3.98□□□□□ -1.77
Sdc1P18828 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC3.98□□□□□ -1.77
Sdc1P18828 Gm24636-201ENSMUST00000158673 288 ntBASIC3.98□□□□□ -1.77
Sdc1P18828 Gm24733-201ENSMUST00000158863 253 ntBASIC3.98□□□□□ -1.77
Sdc1P18828 Gm23774-201ENSMUST00000158990 131 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms