Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Cdx1P18111 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Cdx1P18111 AC110043.1-201ENSMUST00000220278 1627 ntBASIC4.22□□□□□ -1.73
Cdx1P18111 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Cdx1P18111 Gm22592-201ENSMUST00000104242 131 ntBASIC4.22□□□□□ -1.73
Cdx1P18111 Gm15772-201ENSMUST00000118533 438 ntBASIC4.22□□□□□ -1.73
Cdx1P18111 Gm11826-201ENSMUST00000118781 438 ntBASIC4.22□□□□□ -1.73
Cdx1P18111 Gm5133-201ENSMUST00000118940 1255 ntBASIC4.22□□□□□ -1.73
Cdx1P18111 Gm14516-201ENSMUST00000120012 252 ntBASIC4.22□□□□□ -1.73
Cdx1P18111 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC4.22□□□□□ -1.73
Cdx1P18111 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Cdx1P18111 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC4.22□□□□□ -1.73
Cdx1P18111 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Cdx1P18111 Mir1970-201ENSMUST00000157839 104 ntBASIC4.22□□□□□ -1.73
Cdx1P18111 Gm2389-201ENSMUST00000160487 189 ntBASIC4.22□□□□□ -1.73
Cdx1P18111 Mir3080-201ENSMUST00000175010 79 ntBASIC4.22□□□□□ -1.73
Cdx1P18111 Gm9457-201ENSMUST00000180176 372 ntBASIC4.22□□□□□ -1.73
Cdx1P18111 Gm27976-201ENSMUST00000183635 162 ntBASIC4.22□□□□□ -1.73
Cdx1P18111 Gm28188-201ENSMUST00000190483 236 ntBASIC4.22□□□□□ -1.73
Cdx1P18111 Gm37480-201ENSMUST00000194795 550 ntTSL 5 BASIC4.22□□□□□ -1.73
Cdx1P18111 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC4.22□□□□□ -1.73
Cdx1P18111 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC4.22□□□□□ -1.73
Cdx1P18111 Gm44403-201ENSMUST00000198554 129 ntBASIC4.22□□□□□ -1.73
Cdx1P18111 Gm2287-202ENSMUST00000199619 1000 ntBASIC4.22□□□□□ -1.73
Cdx1P18111 Gm19060-201ENSMUST00000201959 421 ntBASIC4.22□□□□□ -1.73
Cdx1P18111 Gm44820-201ENSMUST00000207420 396 ntBASIC4.22□□□□□ -1.73
Cdx1P18111 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC4.22□□□□□ -1.73
Cdx1P18111 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Cdx1P18111 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Cdx1P18111 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC4.22□□□□□ -1.73
Cdx1P18111 Gm45777-201ENSMUST00000213009 301 ntBASIC4.22□□□□□ -1.73
Cdx1P18111 Gm8106-201ENSMUST00000213123 523 ntBASIC4.22□□□□□ -1.73
Cdx1P18111 AC122332.1-201ENSMUST00000214384 285 ntBASIC4.22□□□□□ -1.73
Cdx1P18111 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC4.22□□□□□ -1.73
Cdx1P18111 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Cdx1P18111 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Cdx1P18111 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
Cdx1P18111 Mir337-201ENSMUST00000083592 97 ntBASIC4.22□□□□□ -1.73
Cdx1P18111 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Cdx1P18111 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Cdx1P18111 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC4.22□□□□□ -1.73
Cdx1P18111 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Cdx1P18111 Gm2987-201ENSMUST00000187673 1693 ntBASIC4.22□□□□□ -1.73
Cdx1P18111 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Cdx1P18111 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Cdx1P18111 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Cdx1P18111 Gm43662-201ENSMUST00000198310 2271 ntBASIC4.21□□□□□ -1.73
Cdx1P18111 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
Cdx1P18111 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
Cdx1P18111 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
Cdx1P18111 Gm43010-201ENSMUST00000195993 2878 ntBASIC4.21□□□□□ -1.73
Cdx1P18111 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Cdx1P18111 Gm13961-201ENSMUST00000119282 4772 ntBASIC4.21□□□□□ -1.74
Cdx1P18111 Ear-ps2-201ENSMUST00000100689 466 ntBASIC4.21□□□□□ -1.74
Cdx1P18111 Mir879-201ENSMUST00000104703 76 ntBASIC4.21□□□□□ -1.74
Cdx1P18111 Gm8475-201ENSMUST00000118211 526 ntBASIC4.21□□□□□ -1.74
Cdx1P18111 Gm15660-201ENSMUST00000118997 478 ntBASIC4.21□□□□□ -1.74
Cdx1P18111 Gm22958-201ENSMUST00000122512 184 ntBASIC4.21□□□□□ -1.74
Cdx1P18111 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC4.21□□□□□ -1.74
Cdx1P18111 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC4.21□□□□□ -1.74
Cdx1P18111 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Cdx1P18111 Gm25826-201ENSMUST00000157090 137 ntBASIC4.21□□□□□ -1.74
Cdx1P18111 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC4.21□□□□□ -1.74
Cdx1P18111 Mir3090-201ENSMUST00000175597 87 ntBASIC4.21□□□□□ -1.74
Cdx1P18111 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Cdx1P18111 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC4.21□□□□□ -1.74
Cdx1P18111 Vis1-201ENSMUST00000183957 201 ntBASIC4.21□□□□□ -1.74
Cdx1P18111 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Cdx1P18111 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC4.21□□□□□ -1.74
Cdx1P18111 Gm37341-201ENSMUST00000194680 371 ntBASIC4.21□□□□□ -1.74
Cdx1P18111 Gm7733-201ENSMUST00000199038 919 ntBASIC4.21□□□□□ -1.74
Cdx1P18111 Gm42814-201ENSMUST00000199370 460 ntBASIC4.21□□□□□ -1.74
Cdx1P18111 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC4.21□□□□□ -1.74
Cdx1P18111 Gm44219-201ENSMUST00000203005 273 ntBASIC4.21□□□□□ -1.74
Cdx1P18111 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC4.21□□□□□ -1.74
Cdx1P18111 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Cdx1P18111 Gm31166-201ENSMUST00000209326 288 ntBASIC4.21□□□□□ -1.74
Cdx1P18111 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC4.21□□□□□ -1.74
Cdx1P18111 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC4.21□□□□□ -1.74
Cdx1P18111 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC4.21□□□□□ -1.74
Cdx1P18111 Gm18705-201ENSMUST00000215985 913 ntBASIC4.21□□□□□ -1.74
Cdx1P18111 AC153800.1-201ENSMUST00000219212 365 ntBASIC4.21□□□□□ -1.74
Cdx1P18111 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Cdx1P18111 AC106830.1-201ENSMUST00000228032 1003 ntBASIC4.21□□□□□ -1.74
Cdx1P18111 AC166369.2-201ENSMUST00000228403 308 ntBASIC4.21□□□□□ -1.74
Cdx1P18111 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Cdx1P18111 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Cdx1P18111 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Cdx1P18111 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Cdx1P18111 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Cdx1P18111 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Cdx1P18111 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
Cdx1P18111 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Cdx1P18111 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Cdx1P18111 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Cdx1P18111 Gm45223-201ENSMUST00000207037 5138 ntBASIC4.21□□□□□ -1.74
Cdx1P18111 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
Cdx1P18111 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Cdx1P18111 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.21□□□□□ -1.74
Cdx1P18111 AC156632.1-201ENSMUST00000220626 3845 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms