Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
Chmp6P0C0A3 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Chmp6P0C0A3 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Chmp6P0C0A3 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Chmp6P0C0A3 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Chmp6P0C0A3 Gm44587-201ENSMUST00000207399 1685 ntBASIC5.34□□□□□ -1.55
Chmp6P0C0A3 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Chmp6P0C0A3 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Chmp6P0C0A3 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Chmp6P0C0A3 Gm45324-201ENSMUST00000211193 5638 ntBASIC5.34□□□□□ -1.55
Chmp6P0C0A3 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
Chmp6P0C0A3 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Chmp6P0C0A3 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Chmp6P0C0A3 Mir879-201ENSMUST00000104703 76 ntBASIC5.34□□□□□ -1.55
Chmp6P0C0A3 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC5.34□□□□□ -1.55
Chmp6P0C0A3 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Chmp6P0C0A3 Gm8129-201ENSMUST00000118230 213 ntBASIC5.34□□□□□ -1.55
Chmp6P0C0A3 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Chmp6P0C0A3 Gm13007-201ENSMUST00000121866 365 ntBASIC5.34□□□□□ -1.55
Chmp6P0C0A3 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Chmp6P0C0A3 Gm16254-201ENSMUST00000131528 730 ntBASIC5.34□□□□□ -1.55
Chmp6P0C0A3 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC5.34□□□□□ -1.55
Chmp6P0C0A3 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Chmp6P0C0A3 Gm23700-201ENSMUST00000158842 102 ntBASIC5.34□□□□□ -1.55
Chmp6P0C0A3 Gm4134-201ENSMUST00000173244 563 ntBASIC5.34□□□□□ -1.55
Chmp6P0C0A3 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC5.34□□□□□ -1.55
Chmp6P0C0A3 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC5.34□□□□□ -1.55
Chmp6P0C0A3 Gm16456-201ENSMUST00000174431 920 ntBASIC5.34□□□□□ -1.55
Chmp6P0C0A3 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC5.34□□□□□ -1.55
Chmp6P0C0A3 Gm28769-201ENSMUST00000190176 615 ntBASIC5.34□□□□□ -1.55
Chmp6P0C0A3 Gm18426-201ENSMUST00000191874 973 ntBASIC5.34□□□□□ -1.55
Chmp6P0C0A3 Gm6649-201ENSMUST00000199743 1165 ntBASIC5.34□□□□□ -1.55
Chmp6P0C0A3 Gm19617-201ENSMUST00000202977 308 ntBASIC5.34□□□□□ -1.55
Chmp6P0C0A3 Gm44431-201ENSMUST00000203500 413 ntBASIC5.34□□□□□ -1.55
Chmp6P0C0A3 Gm44184-201ENSMUST00000204290 132 ntBASIC5.34□□□□□ -1.55
Chmp6P0C0A3 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Chmp6P0C0A3 Gm18850-201ENSMUST00000211578 388 ntBASIC5.34□□□□□ -1.55
Chmp6P0C0A3 AC137127.3-201ENSMUST00000213340 349 ntBASIC5.34□□□□□ -1.55
Chmp6P0C0A3 AC153961.2-201ENSMUST00000218877 164 ntBASIC5.34□□□□□ -1.55
Chmp6P0C0A3 Gm18510-201ENSMUST00000219335 1096 ntBASIC5.34□□□□□ -1.55
Chmp6P0C0A3 Gm9512-201ENSMUST00000223112 497 ntBASIC5.34□□□□□ -1.55
Chmp6P0C0A3 Olfr654-201ENSMUST00000098173 1155 ntBASIC5.34□□□□□ -1.55
Chmp6P0C0A3 AC123705.3-201ENSMUST00000223531 2069 ntBASIC5.34□□□□□ -1.55
Chmp6P0C0A3 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Chmp6P0C0A3 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Chmp6P0C0A3 Gm43426-201ENSMUST00000197287 2597 ntBASIC5.34□□□□□ -1.55
Chmp6P0C0A3 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Chmp6P0C0A3 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Chmp6P0C0A3 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Chmp6P0C0A3 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Chmp6P0C0A3 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Chmp6P0C0A3 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Chmp6P0C0A3 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Chmp6P0C0A3 Gm43845-201ENSMUST00000202462 1820 ntBASIC5.33□□□□□ -1.56
Chmp6P0C0A3 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Chmp6P0C0A3 Mir466i-201ENSMUST00000116924 121 ntBASIC5.33□□□□□ -1.56
Chmp6P0C0A3 Gm14995-201ENSMUST00000117135 391 ntBASIC5.33□□□□□ -1.56
Chmp6P0C0A3 Gm13195-201ENSMUST00000117229 261 ntBASIC5.33□□□□□ -1.56
Chmp6P0C0A3 Gm15390-201ENSMUST00000120323 738 ntBASIC5.33□□□□□ -1.56
Chmp6P0C0A3 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC5.33□□□□□ -1.56
Chmp6P0C0A3 Gm13430-201ENSMUST00000121366 288 ntBASIC5.33□□□□□ -1.56
Chmp6P0C0A3 Defa-ps14-201ENSMUST00000121373 418 ntBASIC5.33□□□□□ -1.56
Chmp6P0C0A3 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC5.33□□□□□ -1.56
Chmp6P0C0A3 Gm23965-201ENSMUST00000157969 142 ntBASIC5.33□□□□□ -1.56
Chmp6P0C0A3 Gm26404-201ENSMUST00000158498 109 ntBASIC5.33□□□□□ -1.56
Chmp6P0C0A3 Gm25048-201ENSMUST00000158598 91 ntBASIC5.33□□□□□ -1.56
Chmp6P0C0A3 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC5.33□□□□□ -1.56
Chmp6P0C0A3 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Chmp6P0C0A3 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC5.33□□□□□ -1.56
Chmp6P0C0A3 Gm5511-201ENSMUST00000189380 802 ntBASIC5.33□□□□□ -1.56
Chmp6P0C0A3 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Chmp6P0C0A3 Gm43768-201ENSMUST00000198380 1258 ntBASIC5.33□□□□□ -1.56
Chmp6P0C0A3 Gm43036-201ENSMUST00000200594 373 ntBASIC5.33□□□□□ -1.56
Chmp6P0C0A3 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC5.33□□□□□ -1.56
Chmp6P0C0A3 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Chmp6P0C0A3 Gm18127-201ENSMUST00000208479 725 ntBASIC5.33□□□□□ -1.56
Chmp6P0C0A3 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC5.33□□□□□ -1.56
Chmp6P0C0A3 AC146601.1-201ENSMUST00000227910 905 ntBASIC5.33□□□□□ -1.56
Chmp6P0C0A3 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Chmp6P0C0A3 Gm23302-201ENSMUST00000082710 100 ntBASIC5.33□□□□□ -1.56
Chmp6P0C0A3 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Chmp6P0C0A3 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Chmp6P0C0A3 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Chmp6P0C0A3 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Chmp6P0C0A3 Gm37562-201ENSMUST00000194763 4328 ntBASIC5.33□□□□□ -1.56
Chmp6P0C0A3 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC5.33□□□□□ -1.56
Chmp6P0C0A3 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC5.32□□□□□ -1.56
Chmp6P0C0A3 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC5.32□□□□□ -1.56
Chmp6P0C0A3 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Chmp6P0C0A3 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC5.32□□□□□ -1.56
Chmp6P0C0A3 Gm45149-201ENSMUST00000206459 2172 ntBASIC5.32□□□□□ -1.56
Chmp6P0C0A3 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Chmp6P0C0A3 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Chmp6P0C0A3 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Chmp6P0C0A3 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC5.32□□□□□ -1.56
Chmp6P0C0A3 Gm12039-201ENSMUST00000118219 180 ntBASIC5.32□□□□□ -1.56
Chmp6P0C0A3 Gm12820-201ENSMUST00000119233 342 ntBASIC5.32□□□□□ -1.56
Chmp6P0C0A3 Gm12332-201ENSMUST00000121397 922 ntBASIC5.32□□□□□ -1.56
Chmp6P0C0A3 Gm12854-201ENSMUST00000128518 297 ntBASIC5.32□□□□□ -1.56
Chmp6P0C0A3 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC5.32□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms