Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Trim3Q9R1R2 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Trim3Q9R1R2 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC4.79□□□□□ -1.64
Trim3Q9R1R2 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Trim3Q9R1R2 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Trim3Q9R1R2 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
Trim3Q9R1R2 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Trim3Q9R1R2 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Trim3Q9R1R2 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC4.79□□□□□ -1.64
Trim3Q9R1R2 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Trim3Q9R1R2 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Trim3Q9R1R2 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Trim3Q9R1R2 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Trim3Q9R1R2 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
Trim3Q9R1R2 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Trim3Q9R1R2 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Trim3Q9R1R2 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Trim3Q9R1R2 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Trim3Q9R1R2 Gm9085-201ENSMUST00000119994 1072 ntBASIC4.79□□□□□ -1.64
Trim3Q9R1R2 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC4.79□□□□□ -1.64
Trim3Q9R1R2 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC4.79□□□□□ -1.64
Trim3Q9R1R2 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC4.79□□□□□ -1.64
Trim3Q9R1R2 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Trim3Q9R1R2 Gm26354-201ENSMUST00000158221 129 ntBASIC4.79□□□□□ -1.64
Trim3Q9R1R2 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Trim3Q9R1R2 Gm19206-201ENSMUST00000186401 827 ntBASIC4.79□□□□□ -1.64
Trim3Q9R1R2 Gm18036-201ENSMUST00000195256 272 ntBASIC4.79□□□□□ -1.64
Trim3Q9R1R2 Gm44456-201ENSMUST00000196554 89 ntBASIC4.79□□□□□ -1.64
Trim3Q9R1R2 Gm43712-201ENSMUST00000198020 291 ntBASIC4.79□□□□□ -1.64
Trim3Q9R1R2 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC4.79□□□□□ -1.64
Trim3Q9R1R2 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC4.79□□□□□ -1.64
Trim3Q9R1R2 Gm44690-201ENSMUST00000207984 382 ntBASIC4.79□□□□□ -1.64
Trim3Q9R1R2 AC160031.1-201ENSMUST00000219914 522 ntBASIC4.79□□□□□ -1.64
Trim3Q9R1R2 AC154618.1-201ENSMUST00000227451 303 ntBASIC4.79□□□□□ -1.64
Trim3Q9R1R2 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Trim3Q9R1R2 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Trim3Q9R1R2 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Trim3Q9R1R2 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Trim3Q9R1R2 Gm43784-201ENSMUST00000202922 2436 ntBASIC4.79□□□□□ -1.64
Trim3Q9R1R2 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC4.79□□□□□ -1.64
Trim3Q9R1R2 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Trim3Q9R1R2 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Trim3Q9R1R2 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
Trim3Q9R1R2 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Trim3Q9R1R2 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Trim3Q9R1R2 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
Trim3Q9R1R2 Gm37726-201ENSMUST00000193246 3886 ntBASIC4.78□□□□□ -1.64
Trim3Q9R1R2 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Trim3Q9R1R2 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC4.78□□□□□ -1.64
Trim3Q9R1R2 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Trim3Q9R1R2 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Trim3Q9R1R2 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Trim3Q9R1R2 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Trim3Q9R1R2 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Trim3Q9R1R2 Mir676-201ENSMUST00000102443 89 ntBASIC4.78□□□□□ -1.64
Trim3Q9R1R2 n-R5s98-201ENSMUST00000122549 119 ntBASIC4.78□□□□□ -1.64
Trim3Q9R1R2 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Trim3Q9R1R2 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Trim3Q9R1R2 Gm8321-201ENSMUST00000181691 980 ntBASIC4.78□□□□□ -1.64
Trim3Q9R1R2 Mir6343-201ENSMUST00000183584 84 ntBASIC4.78□□□□□ -1.64
Trim3Q9R1R2 Mir6400-201ENSMUST00000184870 92 ntBASIC4.78□□□□□ -1.64
Trim3Q9R1R2 Gm28871-201ENSMUST00000186191 687 ntBASIC4.78□□□□□ -1.64
Trim3Q9R1R2 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Trim3Q9R1R2 Gm21617-201ENSMUST00000188297 691 ntBASIC4.78□□□□□ -1.64
Trim3Q9R1R2 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Trim3Q9R1R2 Gm5285-201ENSMUST00000193089 666 ntBASIC4.78□□□□□ -1.64
Trim3Q9R1R2 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC4.78□□□□□ -1.64
Trim3Q9R1R2 Gm42542-201ENSMUST00000197978 268 ntBASIC4.78□□□□□ -1.64
Trim3Q9R1R2 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Trim3Q9R1R2 Gm18325-201ENSMUST00000203228 835 ntBASIC4.78□□□□□ -1.64
Trim3Q9R1R2 Gm45660-201ENSMUST00000210267 151 ntBASIC4.78□□□□□ -1.64
Trim3Q9R1R2 Gm45910-201ENSMUST00000212493 1003 ntBASIC4.78□□□□□ -1.64
Trim3Q9R1R2 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Trim3Q9R1R2 Gm18871-201ENSMUST00000218655 745 ntBASIC4.78□□□□□ -1.64
Trim3Q9R1R2 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC4.78□□□□□ -1.64
Trim3Q9R1R2 Zfp429-203ENSMUST00000224684 524 ntBASIC4.78□□□□□ -1.64
Trim3Q9R1R2 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Trim3Q9R1R2 AC122034.1-201ENSMUST00000227641 595 ntBASIC4.78□□□□□ -1.64
Trim3Q9R1R2 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC4.78□□□□□ -1.64
Trim3Q9R1R2 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Trim3Q9R1R2 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Trim3Q9R1R2 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Trim3Q9R1R2 Gm3962-201ENSMUST00000173027 2587 ntBASIC4.78□□□□□ -1.64
Trim3Q9R1R2 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Trim3Q9R1R2 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Trim3Q9R1R2 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Trim3Q9R1R2 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Trim3Q9R1R2 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC4.78□□□□□ -1.64
Trim3Q9R1R2 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Trim3Q9R1R2 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Trim3Q9R1R2 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Trim3Q9R1R2 Gm35629-201ENSMUST00000209684 2241 ntBASIC4.77□□□□□ -1.65
Trim3Q9R1R2 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Trim3Q9R1R2 CT025710.1-201ENSMUST00000222949 2533 ntBASIC4.77□□□□□ -1.65
Trim3Q9R1R2 Gm37114-201ENSMUST00000195065 1804 ntBASIC4.77□□□□□ -1.65
Trim3Q9R1R2 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Trim3Q9R1R2 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
Trim3Q9R1R2 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
Trim3Q9R1R2 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC4.77□□□□□ -1.65
Trim3Q9R1R2 Gm37696-201ENSMUST00000194223 3349 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms