Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm23972-201ENSMUST00000083322 165 ntBASIC4.8□□□□□ -1.64
Lima1Q9ERG0 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Lima1Q9ERG0 Zfp850-201ENSMUST00000099111 941 ntBASIC4.8□□□□□ -1.64
Lima1Q9ERG0 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Lima1Q9ERG0 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC4.8□□□□□ -1.64
Lima1Q9ERG0 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC4.8□□□□□ -1.64
Lima1Q9ERG0 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Lima1Q9ERG0 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
Lima1Q9ERG0 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
Lima1Q9ERG0 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC4.8□□□□□ -1.64
Lima1Q9ERG0 Gm18189-201ENSMUST00000218153 1951 ntBASIC4.8□□□□□ -1.64
Lima1Q9ERG0 Gm42842-201ENSMUST00000197736 3004 ntBASIC4.8□□□□□ -1.64
Lima1Q9ERG0 Gm42559-201ENSMUST00000201811 3532 ntBASIC4.8□□□□□ -1.64
Lima1Q9ERG0 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC4.8□□□□□ -1.64
Lima1Q9ERG0 Gm38020-201ENSMUST00000193066 4676 ntBASIC4.79□□□□□ -1.64
Lima1Q9ERG0 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Lima1Q9ERG0 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Lima1Q9ERG0 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Lima1Q9ERG0 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Lima1Q9ERG0 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Lima1Q9ERG0 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Lima1Q9ERG0 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Lima1Q9ERG0 Gm23193-201ENSMUST00000102427 82 ntBASIC4.79□□□□□ -1.64
Lima1Q9ERG0 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Lima1Q9ERG0 Gm9429-201ENSMUST00000117804 868 ntBASIC4.79□□□□□ -1.64
Lima1Q9ERG0 Gm11781-201ENSMUST00000118328 472 ntBASIC4.79□□□□□ -1.64
Lima1Q9ERG0 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC4.79□□□□□ -1.64
Lima1Q9ERG0 Gm13452-201ENSMUST00000120896 1097 ntBASIC4.79□□□□□ -1.64
Lima1Q9ERG0 Gm22261-201ENSMUST00000158691 324 ntBASIC4.79□□□□□ -1.64
Lima1Q9ERG0 Gm4831-201ENSMUST00000174626 594 ntBASIC4.79□□□□□ -1.64
Lima1Q9ERG0 Mir3080-201ENSMUST00000175010 79 ntBASIC4.79□□□□□ -1.64
Lima1Q9ERG0 Mir7008-201ENSMUST00000184398 63 ntBASIC4.79□□□□□ -1.64
Lima1Q9ERG0 Gm9569-201ENSMUST00000187492 787 ntBASIC4.79□□□□□ -1.64
Lima1Q9ERG0 Gm9443-201ENSMUST00000188406 816 ntBASIC4.79□□□□□ -1.64
Lima1Q9ERG0 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Lima1Q9ERG0 Gm28467-201ENSMUST00000190981 318 ntBASIC4.79□□□□□ -1.64
Lima1Q9ERG0 Gm36983-201ENSMUST00000192280 1102 ntBASIC4.79□□□□□ -1.64
Lima1Q9ERG0 Gm9442-201ENSMUST00000194242 319 ntBASIC4.79□□□□□ -1.64
Lima1Q9ERG0 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC4.79□□□□□ -1.64
Lima1Q9ERG0 Gm42990-201ENSMUST00000199231 312 ntBASIC4.79□□□□□ -1.64
Lima1Q9ERG0 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC4.79□□□□□ -1.64
Lima1Q9ERG0 AC112956.1-201ENSMUST00000213563 492 ntBASIC4.79□□□□□ -1.64
Lima1Q9ERG0 Gm18409-202ENSMUST00000220105 529 ntBASIC4.79□□□□□ -1.64
Lima1Q9ERG0 AC154618.1-201ENSMUST00000227451 303 ntBASIC4.79□□□□□ -1.64
Lima1Q9ERG0 AC124408.1-201ENSMUST00000228938 707 ntBASIC4.79□□□□□ -1.64
Lima1Q9ERG0 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Lima1Q9ERG0 Mir133b-201ENSMUST00000083546 119 ntBASIC4.79□□□□□ -1.64
Lima1Q9ERG0 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Lima1Q9ERG0 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Lima1Q9ERG0 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Lima1Q9ERG0 AC149588.1-201ENSMUST00000228274 3745 ntBASIC4.79□□□□□ -1.64
Lima1Q9ERG0 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Lima1Q9ERG0 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Lima1Q9ERG0 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Lima1Q9ERG0 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Lima1Q9ERG0 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Lima1Q9ERG0 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Lima1Q9ERG0 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Lima1Q9ERG0 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Lima1Q9ERG0 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Lima1Q9ERG0 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Lima1Q9ERG0 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Lima1Q9ERG0 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC4.78□□□□□ -1.64
Lima1Q9ERG0 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC4.78□□□□□ -1.64
Lima1Q9ERG0 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
Lima1Q9ERG0 Gm44171-201ENSMUST00000203701 2109 ntBASIC4.78□□□□□ -1.64
Lima1Q9ERG0 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Lima1Q9ERG0 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Lima1Q9ERG0 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Lima1Q9ERG0 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC4.78□□□□□ -1.64
Lima1Q9ERG0 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Lima1Q9ERG0 Gm11409-201ENSMUST00000118621 403 ntBASIC4.78□□□□□ -1.64
Lima1Q9ERG0 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC4.78□□□□□ -1.64
Lima1Q9ERG0 Gm23902-201ENSMUST00000157571 134 ntBASIC4.78□□□□□ -1.64
Lima1Q9ERG0 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC4.78□□□□□ -1.64
Lima1Q9ERG0 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC4.78□□□□□ -1.64
Lima1Q9ERG0 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Lima1Q9ERG0 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC4.78□□□□□ -1.64
Lima1Q9ERG0 Gm18728-201ENSMUST00000186155 753 ntBASIC4.78□□□□□ -1.64
Lima1Q9ERG0 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Lima1Q9ERG0 Gm34176-201ENSMUST00000192621 474 ntBASIC4.78□□□□□ -1.64
Lima1Q9ERG0 Gm37908-201ENSMUST00000195828 470 ntBASIC4.78□□□□□ -1.64
Lima1Q9ERG0 BX530055.1-201ENSMUST00000197285 122 ntBASIC4.78□□□□□ -1.64
Lima1Q9ERG0 Gm44431-201ENSMUST00000203500 413 ntBASIC4.78□□□□□ -1.64
Lima1Q9ERG0 Gm44776-201ENSMUST00000207212 381 ntBASIC4.78□□□□□ -1.64
Lima1Q9ERG0 AC110381.1-201ENSMUST00000218987 586 ntBASIC4.78□□□□□ -1.64
Lima1Q9ERG0 AC153840.1-201ENSMUST00000219685 313 ntBASIC4.78□□□□□ -1.64
Lima1Q9ERG0 Gm6171-201ENSMUST00000220760 645 ntBASIC4.78□□□□□ -1.64
Lima1Q9ERG0 Gm36501-201ENSMUST00000221857 745 ntBASIC4.78□□□□□ -1.64
Lima1Q9ERG0 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC4.78□□□□□ -1.64
Lima1Q9ERG0 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Lima1Q9ERG0 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Lima1Q9ERG0 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Lima1Q9ERG0 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC4.78□□□□□ -1.64
Lima1Q9ERG0 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
Lima1Q9ERG0 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Lima1Q9ERG0 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Lima1Q9ERG0 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC4.78□□□□□ -1.64
Lima1Q9ERG0 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Lima1Q9ERG0 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms