Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
Cdh23Q99PF4 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC4.71□□□□□ -1.65
Cdh23Q99PF4 Gm38234-201ENSMUST00000195204 421 ntBASIC4.71□□□□□ -1.65
Cdh23Q99PF4 Gm45553-201ENSMUST00000209929 507 ntBASIC4.71□□□□□ -1.65
Cdh23Q99PF4 Gm7786-201ENSMUST00000210494 436 ntBASIC4.71□□□□□ -1.65
Cdh23Q99PF4 AC121947.1-201ENSMUST00000221755 1145 ntBASIC4.71□□□□□ -1.65
Cdh23Q99PF4 Vmn1r89-206ENSMUST00000227319 985 ntBASIC4.71□□□□□ -1.65
Cdh23Q99PF4 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
Cdh23Q99PF4 Gm45424-201ENSMUST00000210575 3300 ntBASIC4.71□□□□□ -1.65
Cdh23Q99PF4 Clasp1-206ENSMUST00000186349 7281 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
Cdh23Q99PF4 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Cdh23Q99PF4 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Cdh23Q99PF4 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Cdh23Q99PF4 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Cdh23Q99PF4 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC4.71□□□□□ -1.66
Cdh23Q99PF4 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC4.71□□□□□ -1.66
Cdh23Q99PF4 Gm25264-201ENSMUST00000158519 117 ntBASIC4.71□□□□□ -1.66
Cdh23Q99PF4 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Cdh23Q99PF4 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Cdh23Q99PF4 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Cdh23Q99PF4 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC4.71□□□□□ -1.66
Cdh23Q99PF4 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Cdh23Q99PF4 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Cdh23Q99PF4 Gm11781-201ENSMUST00000118328 472 ntBASIC4.71□□□□□ -1.66
Cdh23Q99PF4 Gm13162-201ENSMUST00000121481 454 ntBASIC4.71□□□□□ -1.66
Cdh23Q99PF4 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC4.71□□□□□ -1.66
Cdh23Q99PF4 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Cdh23Q99PF4 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Cdh23Q99PF4 Gm45392-201ENSMUST00000210441 214 ntBASIC4.71□□□□□ -1.66
Cdh23Q99PF4 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC4.71□□□□□ -1.66
Cdh23Q99PF4 Fam107b-209ENSMUST00000226435 3602 ntBASIC4.7□□□□□ -1.66
Cdh23Q99PF4 Gm6645-201ENSMUST00000118505 2726 ntBASIC4.7□□□□□ -1.66
Cdh23Q99PF4 Gm12638-201ENSMUST00000119531 298 ntBASIC4.7□□□□□ -1.66
Cdh23Q99PF4 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Cdh23Q99PF4 Mir5106-201ENSMUST00000174936 73 ntBASIC4.7□□□□□ -1.66
Cdh23Q99PF4 Gm29240-201ENSMUST00000187248 286 ntBASIC4.7□□□□□ -1.66
Cdh23Q99PF4 Gm23300-201ENSMUST00000082712 125 ntBASIC4.7□□□□□ -1.66
Cdh23Q99PF4 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Cdh23Q99PF4 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Cdh23Q99PF4 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cdh23Q99PF4 Grk1-202ENSMUST00000209909 7431 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Cdh23Q99PF4 Grk1-201ENSMUST00000033827 7425 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cdh23Q99PF4 Tbc1d5-201ENSMUST00000024717 5435 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cdh23Q99PF4 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Cdh23Q99PF4 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Cdh23Q99PF4 Gm42736-201ENSMUST00000200723 1353 ntBASIC4.7□□□□□ -1.66
Cdh23Q99PF4 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Cdh23Q99PF4 Akap2-205ENSMUST00000102903 6650 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Cdh23Q99PF4 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Cdh23Q99PF4 Gm37621-201ENSMUST00000194716 5531 ntBASIC4.7□□□□□ -1.66
Cdh23Q99PF4 Defa-ps5-201ENSMUST00000121541 279 ntBASIC4.7□□□□□ -1.66
Cdh23Q99PF4 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC4.7□□□□□ -1.66
Cdh23Q99PF4 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC4.7□□□□□ -1.66
Cdh23Q99PF4 Gm27037-201ENSMUST00000182270 960 ntBASIC4.7□□□□□ -1.66
Cdh23Q99PF4 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Cdh23Q99PF4 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC4.7□□□□□ -1.66
Cdh23Q99PF4 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cdh23Q99PF4 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cdh23Q99PF4 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
Cdh23Q99PF4 Amot-201ENSMUST00000112835 6519 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Cdh23Q99PF4 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Cdh23Q99PF4 Satb1-213ENSMUST00000169480 6194 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
Cdh23Q99PF4 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cdh23Q99PF4 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cdh23Q99PF4 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cdh23Q99PF4 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cdh23Q99PF4 Mgat4a-201ENSMUST00000042161 7030 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cdh23Q99PF4 Cntrl-212ENSMUST00000156933 7189 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Cdh23Q99PF4 Gm45727-201ENSMUST00000212886 572 ntBASIC4.7□□□□□ -1.66
Cdh23Q99PF4 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cdh23Q99PF4 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Cdh23Q99PF4 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Cdh23Q99PF4 Gm3978-201ENSMUST00000163406 2512 ntBASIC4.69□□□□□ -1.66
Cdh23Q99PF4 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Cdh23Q99PF4 Adgrl3-211ENSMUST00000120128 6370 ntTSL 5 BASIC4.69□□□□□ -1.66
Cdh23Q99PF4 Gm45517-201ENSMUST00000209973 2468 ntBASIC4.69□□□□□ -1.66
Cdh23Q99PF4 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Cdh23Q99PF4 Gm45211-201ENSMUST00000206208 2650 ntBASIC4.69□□□□□ -1.66
Cdh23Q99PF4 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Cdh23Q99PF4 Gm18303-201ENSMUST00000190055 1176 ntBASIC4.69□□□□□ -1.66
Cdh23Q99PF4 Gm38061-201ENSMUST00000192490 365 ntBASIC4.69□□□□□ -1.66
Cdh23Q99PF4 Gm17781-201ENSMUST00000195232 649 ntBASIC4.69□□□□□ -1.66
Cdh23Q99PF4 Gm8023-201ENSMUST00000195298 903 ntBASIC4.69□□□□□ -1.66
Cdh23Q99PF4 Gm45156-201ENSMUST00000207255 439 ntBASIC4.69□□□□□ -1.66
Cdh23Q99PF4 n-R5s162-201ENSMUST00000082581 119 ntBASIC4.69□□□□□ -1.66
Cdh23Q99PF4 AC115970.1-201ENSMUST00000218910 1758 ntBASIC4.69□□□□□ -1.66
Cdh23Q99PF4 Gm10513-201ENSMUST00000194203 6468 ntBASIC4.69□□□□□ -1.66
Cdh23Q99PF4 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Cdh23Q99PF4 Gm5182-201ENSMUST00000217708 6092 ntBASIC4.69□□□□□ -1.66
Cdh23Q99PF4 Gm37769-201ENSMUST00000193753 2369 ntBASIC4.69□□□□□ -1.66
Cdh23Q99PF4 Scn11a-201ENSMUST00000070617 5837 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Cdh23Q99PF4 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Cdh23Q99PF4 Tcf4-207ENSMUST00000114985 8577 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Cdh23Q99PF4 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Cdh23Q99PF4 Gm15151-201ENSMUST00000117106 177 ntBASIC4.69□□□□□ -1.66
Cdh23Q99PF4 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
Cdh23Q99PF4 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Cdh23Q99PF4 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Cdh23Q99PF4 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Cdh23Q99PF4 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC4.69□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms