Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Lsm1Q8VC85 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Lsm1Q8VC85 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Lsm1Q8VC85 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Lsm1Q8VC85 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Lsm1Q8VC85 Gm6162-201ENSMUST00000194870 2930 ntBASIC4.79□□□□□ -1.64
Lsm1Q8VC85 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Lsm1Q8VC85 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Lsm1Q8VC85 Gm45129-201ENSMUST00000208444 2224 ntBASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Lsm1Q8VC85 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Gm11912-201ENSMUST00000117235 264 ntBASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Gm12423-201ENSMUST00000118334 135 ntBASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Gm14082-201ENSMUST00000118582 801 ntBASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Gm11805-201ENSMUST00000121238 600 ntBASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Gm8061-201ENSMUST00000122380 350 ntBASIC4.78□□□□□ -1.64
Lsm1Q8VC85 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Gm25714-201ENSMUST00000158626 296 ntBASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Gm17421-201ENSMUST00000167845 674 ntBASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Gm27602-201ENSMUST00000183861 111 ntBASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Gm28429-201ENSMUST00000188521 363 ntBASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Gm28116-201ENSMUST00000189064 387 ntBASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Gm37681-201ENSMUST00000193880 727 ntBASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Gm44376-201ENSMUST00000197570 128 ntBASIC4.78□□□□□ -1.64
Lsm1Q8VC85 AL645522.1-201ENSMUST00000197692 104 ntBASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Gm44162-201ENSMUST00000203543 544 ntBASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Gm18468-201ENSMUST00000207321 369 ntBASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Gm18470-201ENSMUST00000207467 420 ntBASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Gm18465-201ENSMUST00000207468 369 ntBASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Gm18464-201ENSMUST00000207803 420 ntBASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Gm18458-201ENSMUST00000207908 369 ntBASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Gm18461-201ENSMUST00000208421 420 ntBASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Gm21112-201ENSMUST00000212224 578 ntBASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Gm7760-201ENSMUST00000212265 578 ntBASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Gm7807-201ENSMUST00000212475 578 ntBASIC4.78□□□□□ -1.64
Lsm1Q8VC85 AC138284.2-201ENSMUST00000213982 567 ntBASIC4.78□□□□□ -1.64
Lsm1Q8VC85 AC131720.3-201ENSMUST00000219113 275 ntBASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Gm19195-201ENSMUST00000222018 511 ntBASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC4.78□□□□□ -1.64
Lsm1Q8VC85 AC154270.1-201ENSMUST00000227226 426 ntBASIC4.78□□□□□ -1.64
Lsm1Q8VC85 AC160120.1-201ENSMUST00000227446 663 ntBASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Lsm1Q8VC85 AC122382.2-201ENSMUST00000225128 3602 ntBASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Gm42548-201ENSMUST00000202669 3933 ntBASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
Lsm1Q8VC85 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Lsm1Q8VC85 AC139218.1-201ENSMUST00000228215 4287 ntBASIC4.77□□□□□ -1.65
Lsm1Q8VC85 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Gm23692-201ENSMUST00000101881 160 ntBASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Gm8202-201ENSMUST00000117682 310 ntBASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Gm8595-201ENSMUST00000118250 630 ntBASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Gm17046-201ENSMUST00000168078 850 ntBASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Gm27985-201ENSMUST00000185112 378 ntBASIC4.77□□□□□ -1.65
Lsm1Q8VC85 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Gm28943-201ENSMUST00000186187 615 ntBASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Gm28736-201ENSMUST00000186257 615 ntBASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Gm29401-201ENSMUST00000186690 615 ntBASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Gm29178-204ENSMUST00000186784 615 ntBASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Gm28589-201ENSMUST00000186991 615 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms