Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC6.23□□□□□ -1.41
Vps53Q8CCB4 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Vps53Q8CCB4 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC6.23□□□□□ -1.41
Vps53Q8CCB4 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Vps53Q8CCB4 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC6.23□□□□□ -1.41
Vps53Q8CCB4 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Vps53Q8CCB4 Gm5946-201ENSMUST00000182340 970 ntBASIC6.23□□□□□ -1.41
Vps53Q8CCB4 Mir6412-201ENSMUST00000184477 97 ntBASIC6.23□□□□□ -1.41
Vps53Q8CCB4 Mir7028-201ENSMUST00000185016 64 ntBASIC6.23□□□□□ -1.41
Vps53Q8CCB4 Gm37503-201ENSMUST00000192088 319 ntBASIC6.23□□□□□ -1.41
Vps53Q8CCB4 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Vps53Q8CCB4 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC6.23□□□□□ -1.41
Vps53Q8CCB4 AC153932.1-201ENSMUST00000218558 787 ntBASIC6.23□□□□□ -1.41
Vps53Q8CCB4 AC156576.2-202ENSMUST00000222525 411 ntBASIC6.23□□□□□ -1.41
Vps53Q8CCB4 AC153794.2-201ENSMUST00000222650 550 ntBASIC6.23□□□□□ -1.41
Vps53Q8CCB4 AC132833.3-201ENSMUST00000227472 866 ntBASIC6.23□□□□□ -1.41
Vps53Q8CCB4 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Vps53Q8CCB4 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Vps53Q8CCB4 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Vps53Q8CCB4 Mir31-201ENSMUST00000083474 106 ntBASIC6.23□□□□□ -1.41
Vps53Q8CCB4 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Vps53Q8CCB4 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Vps53Q8CCB4 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Vps53Q8CCB4 Gm27013-202ENSMUST00000205067 1436 ntBASIC6.23□□□□□ -1.41
Vps53Q8CCB4 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
Vps53Q8CCB4 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
Vps53Q8CCB4 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Vps53Q8CCB4 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Vps53Q8CCB4 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Vps53Q8CCB4 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Vps53Q8CCB4 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Vps53Q8CCB4 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Vps53Q8CCB4 Gm35629-201ENSMUST00000209684 2241 ntBASIC6.22□□□□□ -1.41
Vps53Q8CCB4 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Vps53Q8CCB4 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Vps53Q8CCB4 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC6.22□□□□□ -1.41
Vps53Q8CCB4 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Vps53Q8CCB4 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Vps53Q8CCB4 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC6.22□□□□□ -1.41
Vps53Q8CCB4 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Vps53Q8CCB4 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Vps53Q8CCB4 Gm22676-201ENSMUST00000116972 129 ntBASIC6.22□□□□□ -1.41
Vps53Q8CCB4 Gm12584-201ENSMUST00000117109 1105 ntBASIC6.22□□□□□ -1.41
Vps53Q8CCB4 Gm16089-201ENSMUST00000117679 336 ntBASIC6.22□□□□□ -1.41
Vps53Q8CCB4 Gm14790-201ENSMUST00000117760 1293 ntBASIC6.22□□□□□ -1.41
Vps53Q8CCB4 Gm14788-201ENSMUST00000119457 375 ntBASIC6.22□□□□□ -1.41
Vps53Q8CCB4 Gm12734-201ENSMUST00000120228 948 ntBASIC6.22□□□□□ -1.41
Vps53Q8CCB4 Gm15529-201ENSMUST00000121833 994 ntBASIC6.22□□□□□ -1.41
Vps53Q8CCB4 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC6.22□□□□□ -1.41
Vps53Q8CCB4 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Vps53Q8CCB4 Gm10319-202ENSMUST00000159439 846 ntBASIC6.22□□□□□ -1.41
Vps53Q8CCB4 Gm15508-201ENSMUST00000160330 325 ntBASIC6.22□□□□□ -1.41
Vps53Q8CCB4 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Vps53Q8CCB4 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Vps53Q8CCB4 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC6.22□□□□□ -1.41
Vps53Q8CCB4 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Vps53Q8CCB4 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC6.22□□□□□ -1.41
Vps53Q8CCB4 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Vps53Q8CCB4 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC6.22□□□□□ -1.41
Vps53Q8CCB4 Mir6516-201ENSMUST00000196236 110 ntBASIC6.22□□□□□ -1.41
Vps53Q8CCB4 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC6.22□□□□□ -1.41
Vps53Q8CCB4 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC6.22□□□□□ -1.41
Vps53Q8CCB4 Gm18215-201ENSMUST00000204429 798 ntBASIC6.22□□□□□ -1.41
Vps53Q8CCB4 Gm44048-201ENSMUST00000204531 361 ntBASIC6.22□□□□□ -1.41
Vps53Q8CCB4 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC6.22□□□□□ -1.41
Vps53Q8CCB4 AC123067.1-201ENSMUST00000217711 462 ntBASIC6.22□□□□□ -1.41
Vps53Q8CCB4 AC162467.1-201ENSMUST00000220254 621 ntBASIC6.22□□□□□ -1.41
Vps53Q8CCB4 AC154419.1-201ENSMUST00000227627 272 ntBASIC6.22□□□□□ -1.41
Vps53Q8CCB4 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Vps53Q8CCB4 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Vps53Q8CCB4 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Vps53Q8CCB4 Gm25187-201ENSMUST00000083906 133 ntBASIC6.22□□□□□ -1.41
Vps53Q8CCB4 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Vps53Q8CCB4 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Vps53Q8CCB4 Abcc2-202ENSMUST00000099413 1926 ntBASIC6.22□□□□□ -1.41
Vps53Q8CCB4 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Vps53Q8CCB4 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC6.22□□□□□ -1.41
Vps53Q8CCB4 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC6.22□□□□□ -1.41
Vps53Q8CCB4 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Vps53Q8CCB4 Gm44562-201ENSMUST00000207194 1347 ntBASIC6.22□□□□□ -1.41
Vps53Q8CCB4 Gm12633-201ENSMUST00000117742 1705 ntBASIC6.22□□□□□ -1.41
Vps53Q8CCB4 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Vps53Q8CCB4 Gm45149-201ENSMUST00000206459 2172 ntBASIC6.21□□□□□ -1.41
Vps53Q8CCB4 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
Vps53Q8CCB4 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Vps53Q8CCB4 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.41
Vps53Q8CCB4 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Vps53Q8CCB4 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC6.21□□□□□ -1.41
Vps53Q8CCB4 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Vps53Q8CCB4 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Vps53Q8CCB4 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Vps53Q8CCB4 Gm11970-201ENSMUST00000116105 320 ntBASIC6.21□□□□□ -1.42
Vps53Q8CCB4 Gm12988-201ENSMUST00000119054 478 ntBASIC6.21□□□□□ -1.42
Vps53Q8CCB4 Gm15780-201ENSMUST00000121283 935 ntBASIC6.21□□□□□ -1.42
Vps53Q8CCB4 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Vps53Q8CCB4 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC6.21□□□□□ -1.42
Vps53Q8CCB4 Gm17075-201ENSMUST00000171924 670 ntBASIC6.21□□□□□ -1.42
Vps53Q8CCB4 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC6.21□□□□□ -1.42
Vps53Q8CCB4 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Vps53Q8CCB4 Gm22411-201ENSMUST00000175462 126 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms