Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm37767-201ENSMUST00000193239 1834 ntBASIC4.34□□□□□ -1.71
Col6a6Q8C6K9 Gm11409-201ENSMUST00000118621 403 ntBASIC4.34□□□□□ -1.72
Col6a6Q8C6K9 Gm15385-201ENSMUST00000118725 667 ntBASIC4.34□□□□□ -1.72
Col6a6Q8C6K9 Gm22792-201ENSMUST00000157225 133 ntBASIC4.34□□□□□ -1.72
Col6a6Q8C6K9 Gm23046-201ENSMUST00000158369 284 ntBASIC4.34□□□□□ -1.72
Col6a6Q8C6K9 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Col6a6Q8C6K9 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
Col6a6Q8C6K9 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC4.34□□□□□ -1.72
Col6a6Q8C6K9 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
Col6a6Q8C6K9 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
Col6a6Q8C6K9 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
Col6a6Q8C6K9 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
Col6a6Q8C6K9 Gm44820-201ENSMUST00000207420 396 ntBASIC4.34□□□□□ -1.72
Col6a6Q8C6K9 Gm8911-201ENSMUST00000213986 652 ntBASIC4.34□□□□□ -1.72
Col6a6Q8C6K9 AC165283.1-201ENSMUST00000223390 307 ntBASIC4.34□□□□□ -1.72
Col6a6Q8C6K9 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
Col6a6Q8C6K9 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
Col6a6Q8C6K9 Gm43229-201ENSMUST00000201812 1850 ntBASIC4.34□□□□□ -1.72
Col6a6Q8C6K9 AC120347.2-201ENSMUST00000222224 2015 ntBASIC4.34□□□□□ -1.72
Col6a6Q8C6K9 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
Col6a6Q8C6K9 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC4.34□□□□□ -1.72
Col6a6Q8C6K9 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
Col6a6Q8C6K9 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Gm5248-201ENSMUST00000186108 4046 ntBASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Gm13220-201ENSMUST00000121535 508 ntBASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Gm22986-201ENSMUST00000122753 130 ntBASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Gm19807-201ENSMUST00000173971 667 ntBASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Gm27834-201ENSMUST00000183427 125 ntBASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Gm9569-201ENSMUST00000187492 787 ntBASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Gm44134-202ENSMUST00000204777 545 ntBASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Dus4l-201ENSMUST00000020977 1773 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Gm44822-201ENSMUST00000208559 6389 ntBASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 5430401H09Rik-202ENSMUST00000218836 2620 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Gm43088-201ENSMUST00000197530 2347 ntBASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Gm29138-201ENSMUST00000191444 348 ntBASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Gm37636-201ENSMUST00000193583 359 ntBASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Gm20940-201ENSMUST00000197308 360 ntBASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Gm17956-201ENSMUST00000199931 838 ntBASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Gm19131-201ENSMUST00000203408 789 ntBASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Gm44402-201ENSMUST00000203677 238 ntBASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Gm4574-201ENSMUST00000207804 542 ntBASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Gm45857-201ENSMUST00000212207 356 ntBASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 CT030242.3-201ENSMUST00000221231 581 ntBASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 AL589742.1-201ENSMUST00000226034 349 ntBASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Gm37531-201ENSMUST00000191628 5415 ntBASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Col6a6Q8C6K9 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
Col6a6Q8C6K9 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC4.32□□□□□ -1.72
Col6a6Q8C6K9 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Col6a6Q8C6K9 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
Col6a6Q8C6K9 Gm13058-201ENSMUST00000117097 1435 ntBASIC4.32□□□□□ -1.72
Col6a6Q8C6K9 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Col6a6Q8C6K9 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Col6a6Q8C6K9 Gm14909-201ENSMUST00000117853 351 ntBASIC4.32□□□□□ -1.72
Col6a6Q8C6K9 Gm12186-201ENSMUST00000119050 945 ntBASIC4.32□□□□□ -1.72
Col6a6Q8C6K9 Gm8215-201ENSMUST00000120627 990 ntBASIC4.32□□□□□ -1.72
Col6a6Q8C6K9 Gm5383-201ENSMUST00000121177 617 ntBASIC4.32□□□□□ -1.72
Col6a6Q8C6K9 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Col6a6Q8C6K9 Gm14710-201ENSMUST00000146082 1066 ntBASIC4.32□□□□□ -1.72
Col6a6Q8C6K9 Gm23905-201ENSMUST00000157568 109 ntBASIC4.32□□□□□ -1.72
Col6a6Q8C6K9 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC4.32□□□□□ -1.72
Col6a6Q8C6K9 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC4.32□□□□□ -1.72
Col6a6Q8C6K9 Gm18181-201ENSMUST00000190670 736 ntBASIC4.32□□□□□ -1.72
Col6a6Q8C6K9 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC4.32□□□□□ -1.72
Col6a6Q8C6K9 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms