Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm37090-201ENSMUST00000195694 4105 ntBASIC7.19□□□□□ -1.26
Trim47Q8C0E3 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Trim47Q8C0E3 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Trim47Q8C0E3 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Trim47Q8C0E3 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
Trim47Q8C0E3 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Trim47Q8C0E3 AC134577.3-201ENSMUST00000226490 3000 ntBASIC7.19□□□□□ -1.26
Trim47Q8C0E3 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Trim47Q8C0E3 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Trim47Q8C0E3 Gm13349-201ENSMUST00000118436 411 ntBASIC7.19□□□□□ -1.26
Trim47Q8C0E3 Gm13604-201ENSMUST00000119332 482 ntBASIC7.19□□□□□ -1.26
Trim47Q8C0E3 Gm4852-201ENSMUST00000121202 729 ntBASIC7.19□□□□□ -1.26
Trim47Q8C0E3 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC7.19□□□□□ -1.26
Trim47Q8C0E3 Klra13-ps-201ENSMUST00000125813 802 ntBASIC7.19□□□□□ -1.26
Trim47Q8C0E3 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
Trim47Q8C0E3 Gm25335-201ENSMUST00000158043 103 ntBASIC7.19□□□□□ -1.26
Trim47Q8C0E3 Gm24550-201ENSMUST00000158648 279 ntBASIC7.19□□□□□ -1.26
Trim47Q8C0E3 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Trim47Q8C0E3 Gm26866-201ENSMUST00000180414 802 ntBASIC7.19□□□□□ -1.26
Trim47Q8C0E3 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC7.19□□□□□ -1.26
Trim47Q8C0E3 Gm5260-201ENSMUST00000186157 949 ntBASIC7.19□□□□□ -1.26
Trim47Q8C0E3 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Trim47Q8C0E3 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC7.19□□□□□ -1.26
Trim47Q8C0E3 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC7.19□□□□□ -1.26
Trim47Q8C0E3 Gm38237-201ENSMUST00000193366 376 ntBASIC7.19□□□□□ -1.26
Trim47Q8C0E3 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC7.19□□□□□ -1.26
Trim47Q8C0E3 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC7.19□□□□□ -1.26
Trim47Q8C0E3 AC135353.1-201ENSMUST00000215330 630 ntBASIC7.19□□□□□ -1.26
Trim47Q8C0E3 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC7.19□□□□□ -1.26
Trim47Q8C0E3 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Trim47Q8C0E3 AC154271.1-201ENSMUST00000224780 383 ntBASIC7.19□□□□□ -1.26
Trim47Q8C0E3 AC125539.2-201ENSMUST00000228339 753 ntBASIC7.19□□□□□ -1.26
Trim47Q8C0E3 Gm26442-201ENSMUST00000082588 153 ntBASIC7.19□□□□□ -1.26
Trim47Q8C0E3 Gm24042-201ENSMUST00000083114 103 ntBASIC7.19□□□□□ -1.26
Trim47Q8C0E3 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC7.19□□□□□ -1.26
Trim47Q8C0E3 Mir484-201ENSMUST00000093566 67 ntBASIC7.19□□□□□ -1.26
Trim47Q8C0E3 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Trim47Q8C0E3 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Trim47Q8C0E3 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Trim47Q8C0E3 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
Trim47Q8C0E3 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Trim47Q8C0E3 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC7.19□□□□□ -1.26
Trim47Q8C0E3 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC7.19□□□□□ -1.26
Trim47Q8C0E3 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Trim47Q8C0E3 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC7.19□□□□□ -1.26
Trim47Q8C0E3 Gm37255-201ENSMUST00000193302 3060 ntBASIC7.19□□□□□ -1.26
Trim47Q8C0E3 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Gm37903-201ENSMUST00000192122 2381 ntBASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Gm37725-201ENSMUST00000193965 2125 ntBASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Mir466b-8-201ENSMUST00000103883 86 ntBASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Gm22374-201ENSMUST00000104583 132 ntBASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Gm14385-201ENSMUST00000116315 876 ntBASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Gm13738-201ENSMUST00000122437 469 ntBASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Magea9-ps-201ENSMUST00000140655 732 ntBASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC7.18□□□□□ -1.26
Trim47Q8C0E3 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Gm25904-201ENSMUST00000158491 143 ntBASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Gm22428-201ENSMUST00000158554 132 ntBASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Magea9-ps-202ENSMUST00000167328 899 ntBASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Gm18604-201ENSMUST00000172535 558 ntBASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Gm10410-201ENSMUST00000180138 384 ntBASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Gm26898-201ENSMUST00000181678 384 ntBASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Gm27190-201ENSMUST00000184890 542 ntBASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Gm27998-201ENSMUST00000184902 361 ntBASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Scgb2b33-201ENSMUST00000187413 334 ntBASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Gm17916-202ENSMUST00000187634 1187 ntBASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Gm6074-201ENSMUST00000193340 451 ntBASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Gm43018-201ENSMUST00000198075 1275 ntBASIC7.18□□□□□ -1.26
Trim47Q8C0E3 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Mir466e-201ENSMUST00000198862 84 ntBASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Mir466c-1-201ENSMUST00000200654 84 ntBASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Gm43762-201ENSMUST00000201521 295 ntBASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Gm44221-201ENSMUST00000203552 388 ntBASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC7.18□□□□□ -1.26
Trim47Q8C0E3 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Gm46369-201ENSMUST00000221577 401 ntBASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Trim47Q8C0E3 Gm23679-201ENSMUST00000083161 119 ntBASIC7.18□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms