Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 AC187103.2-201ENSMUST00000223605 1617 ntBASIC4.96□□□□□ -1.62
Trub1Q8C0D0 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Trub1Q8C0D0 AC102431.1-201ENSMUST00000223773 1449 ntBASIC4.96□□□□□ -1.62
Trub1Q8C0D0 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Trub1Q8C0D0 Gm44220-201ENSMUST00000203784 2487 ntBASIC4.96□□□□□ -1.62
Trub1Q8C0D0 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Trub1Q8C0D0 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Trub1Q8C0D0 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC4.95□□□□□ -1.62
Trub1Q8C0D0 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Trub1Q8C0D0 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC4.95□□□□□ -1.62
Trub1Q8C0D0 AC123705.3-201ENSMUST00000223531 2069 ntBASIC4.95□□□□□ -1.62
Trub1Q8C0D0 Gm6162-201ENSMUST00000194870 2930 ntBASIC4.95□□□□□ -1.62
Trub1Q8C0D0 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC4.95□□□□□ -1.62
Trub1Q8C0D0 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Trub1Q8C0D0 Gm2099-202ENSMUST00000223310 3341 ntBASIC4.95□□□□□ -1.62
Trub1Q8C0D0 Gm15745-201ENSMUST00000119807 115 ntBASIC4.95□□□□□ -1.62
Trub1Q8C0D0 Gm14065-201ENSMUST00000120848 585 ntBASIC4.95□□□□□ -1.62
Trub1Q8C0D0 Gm14695-201ENSMUST00000121721 282 ntBASIC4.95□□□□□ -1.62
Trub1Q8C0D0 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC4.95□□□□□ -1.62
Trub1Q8C0D0 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Trub1Q8C0D0 Gm26153-201ENSMUST00000157433 127 ntBASIC4.95□□□□□ -1.62
Trub1Q8C0D0 Gm16107-201ENSMUST00000162523 862 ntBASIC4.95□□□□□ -1.62
Trub1Q8C0D0 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC4.95□□□□□ -1.62
Trub1Q8C0D0 Gm5511-201ENSMUST00000189380 802 ntBASIC4.95□□□□□ -1.62
Trub1Q8C0D0 Vmn1r82-202ENSMUST00000191002 918 ntBASIC4.95□□□□□ -1.62
Trub1Q8C0D0 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC4.95□□□□□ -1.62
Trub1Q8C0D0 Gm38253-201ENSMUST00000194058 4678 ntBASIC4.95□□□□□ -1.62
Trub1Q8C0D0 Igkv12-66-201ENSMUST00000199305 348 ntBASIC4.95□□□□□ -1.62
Trub1Q8C0D0 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
Trub1Q8C0D0 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC4.95□□□□□ -1.62
Trub1Q8C0D0 Gm3816-201ENSMUST00000209803 433 ntBASIC4.95□□□□□ -1.62
Trub1Q8C0D0 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC4.95□□□□□ -1.62
Trub1Q8C0D0 AL589696.1-201ENSMUST00000225711 330 ntBASIC4.95□□□□□ -1.62
Trub1Q8C0D0 AC146601.1-201ENSMUST00000227910 905 ntBASIC4.95□□□□□ -1.62
Trub1Q8C0D0 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC4.95□□□□□ -1.62
Trub1Q8C0D0 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Trub1Q8C0D0 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Trub1Q8C0D0 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Trub1Q8C0D0 Gm14988-201ENSMUST00000117224 1548 ntBASIC4.95□□□□□ -1.62
Trub1Q8C0D0 AC107232.1-201ENSMUST00000227785 1503 ntBASIC4.95□□□□□ -1.62
Trub1Q8C0D0 AC149588.1-201ENSMUST00000228274 3745 ntBASIC4.95□□□□□ -1.62
Trub1Q8C0D0 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Trub1Q8C0D0 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Trub1Q8C0D0 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Trub1Q8C0D0 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Trub1Q8C0D0 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC4.95□□□□□ -1.62
Trub1Q8C0D0 Gm42494-201ENSMUST00000196515 3051 ntBASIC4.95□□□□□ -1.62
Trub1Q8C0D0 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC4.95□□□□□ -1.62
Trub1Q8C0D0 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Trub1Q8C0D0 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Trub1Q8C0D0 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
Trub1Q8C0D0 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Trub1Q8C0D0 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Trub1Q8C0D0 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC4.94□□□□□ -1.62
Trub1Q8C0D0 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Trub1Q8C0D0 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Trub1Q8C0D0 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Trub1Q8C0D0 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Trub1Q8C0D0 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC4.94□□□□□ -1.62
Trub1Q8C0D0 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Trub1Q8C0D0 Gm8145-201ENSMUST00000118220 745 ntBASIC4.94□□□□□ -1.62
Trub1Q8C0D0 Gm8129-201ENSMUST00000118230 213 ntBASIC4.94□□□□□ -1.62
Trub1Q8C0D0 Gm11346-201ENSMUST00000118346 704 ntBASIC4.94□□□□□ -1.62
Trub1Q8C0D0 Gm4853-201ENSMUST00000119359 394 ntBASIC4.94□□□□□ -1.62
Trub1Q8C0D0 Gm15057-201ENSMUST00000121516 534 ntBASIC4.94□□□□□ -1.62
Trub1Q8C0D0 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Trub1Q8C0D0 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC4.94□□□□□ -1.62
Trub1Q8C0D0 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Trub1Q8C0D0 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Trub1Q8C0D0 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Trub1Q8C0D0 Mir6344-201ENSMUST00000183462 104 ntBASIC4.94□□□□□ -1.62
Trub1Q8C0D0 Mir7235-201ENSMUST00000183796 56 ntBASIC4.94□□□□□ -1.62
Trub1Q8C0D0 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC4.94□□□□□ -1.62
Trub1Q8C0D0 Gm44402-201ENSMUST00000203677 238 ntBASIC4.94□□□□□ -1.62
Trub1Q8C0D0 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC4.94□□□□□ -1.62
Trub1Q8C0D0 AC131745.2-201ENSMUST00000225736 565 ntBASIC4.94□□□□□ -1.62
Trub1Q8C0D0 CT025548.1-201ENSMUST00000227459 257 ntBASIC4.94□□□□□ -1.62
Trub1Q8C0D0 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Trub1Q8C0D0 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Trub1Q8C0D0 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Trub1Q8C0D0 Gm4541-201ENSMUST00000208901 1848 ntBASIC4.94□□□□□ -1.62
Trub1Q8C0D0 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Trub1Q8C0D0 Gm44675-201ENSMUST00000208188 2927 ntBASIC4.94□□□□□ -1.62
Trub1Q8C0D0 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Trub1Q8C0D0 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Trub1Q8C0D0 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Trub1Q8C0D0 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Trub1Q8C0D0 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC4.94□□□□□ -1.62
Trub1Q8C0D0 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
Trub1Q8C0D0 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Trub1Q8C0D0 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC4.94□□□□□ -1.62
Trub1Q8C0D0 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
Trub1Q8C0D0 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Trub1Q8C0D0 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC4.93□□□□□ -1.62
Trub1Q8C0D0 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Trub1Q8C0D0 AC162938.2-205ENSMUST00000217551 2828 ntBASIC4.93□□□□□ -1.62
Trub1Q8C0D0 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Trub1Q8C0D0 Gm44587-201ENSMUST00000207399 1685 ntBASIC4.93□□□□□ -1.62
Trub1Q8C0D0 Gm37762-201ENSMUST00000194515 3561 ntBASIC4.93□□□□□ -1.62
Trub1Q8C0D0 Gm42615-201ENSMUST00000197704 1820 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms