Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Usp40Q8BWR4 Gm19035-201ENSMUST00000193299 1742 ntBASIC7.38□□□□□ -1.23
Usp40Q8BWR4 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Usp40Q8BWR4 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Usp40Q8BWR4 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Usp40Q8BWR4 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC7.37□□□□□ -1.23
Usp40Q8BWR4 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Usp40Q8BWR4 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Usp40Q8BWR4 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Usp40Q8BWR4 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC7.37□□□□□ -1.23
Usp40Q8BWR4 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Usp40Q8BWR4 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Usp40Q8BWR4 Gm12994-201ENSMUST00000119601 447 ntBASIC7.37□□□□□ -1.23
Usp40Q8BWR4 Gm12422-201ENSMUST00000121431 302 ntBASIC7.37□□□□□ -1.23
Usp40Q8BWR4 Gm6067-201ENSMUST00000121648 491 ntBASIC7.37□□□□□ -1.23
Usp40Q8BWR4 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC7.37□□□□□ -1.23
Usp40Q8BWR4 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC7.37□□□□□ -1.23
Usp40Q8BWR4 Gm23385-201ENSMUST00000158592 295 ntBASIC7.37□□□□□ -1.23
Usp40Q8BWR4 Gm23700-201ENSMUST00000158842 102 ntBASIC7.37□□□□□ -1.23
Usp40Q8BWR4 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC7.37□□□□□ -1.23
Usp40Q8BWR4 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC7.37□□□□□ -1.23
Usp40Q8BWR4 Gm5334-201ENSMUST00000187472 720 ntBASIC7.37□□□□□ -1.23
Usp40Q8BWR4 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Usp40Q8BWR4 Gm28113-201ENSMUST00000188280 229 ntBASIC7.37□□□□□ -1.23
Usp40Q8BWR4 Trbv9-201ENSMUST00000194494 290 ntBASIC7.37□□□□□ -1.23
Usp40Q8BWR4 Gm46191-201ENSMUST00000218899 433 ntBASIC7.37□□□□□ -1.23
Usp40Q8BWR4 CT030195.1-201ENSMUST00000223887 378 ntBASIC7.37□□□□□ -1.23
Usp40Q8BWR4 Diaph3-206ENSMUST00000226745 713 ntBASIC7.37□□□□□ -1.23
Usp40Q8BWR4 AC163646.1-201ENSMUST00000227704 397 ntBASIC7.37□□□□□ -1.23
Usp40Q8BWR4 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Usp40Q8BWR4 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Usp40Q8BWR4 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Usp40Q8BWR4 Snord15b-201ENSMUST00000083032 145 ntBASIC7.37□□□□□ -1.23
Usp40Q8BWR4 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Usp40Q8BWR4 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Usp40Q8BWR4 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Usp40Q8BWR4 AC120347.2-201ENSMUST00000222224 2015 ntBASIC7.37□□□□□ -1.23
Usp40Q8BWR4 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC7.37□□□□□ -1.23
Usp40Q8BWR4 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Usp40Q8BWR4 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Usp40Q8BWR4 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Usp40Q8BWR4 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Usp40Q8BWR4 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Usp40Q8BWR4 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Usp40Q8BWR4 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Usp40Q8BWR4 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC7.36□□□□□ -1.23
Usp40Q8BWR4 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC7.36□□□□□ -1.23
Usp40Q8BWR4 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Usp40Q8BWR4 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Usp40Q8BWR4 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Usp40Q8BWR4 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC7.36□□□□□ -1.23
Usp40Q8BWR4 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC7.36□□□□□ -1.23
Usp40Q8BWR4 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC7.36□□□□□ -1.23
Usp40Q8BWR4 Gm24186-201ENSMUST00000157983 127 ntBASIC7.36□□□□□ -1.23
Usp40Q8BWR4 Gm24363-201ENSMUST00000158440 311 ntBASIC7.36□□□□□ -1.23
Usp40Q8BWR4 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Usp40Q8BWR4 Gm8993-201ENSMUST00000182182 983 ntBASIC7.36□□□□□ -1.23
Usp40Q8BWR4 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC7.36□□□□□ -1.23
Usp40Q8BWR4 Ighv1-3-201ENSMUST00000192764 302 ntBASIC7.36□□□□□ -1.23
Usp40Q8BWR4 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC7.36□□□□□ -1.23
Usp40Q8BWR4 Gm18635-201ENSMUST00000199020 1060 ntBASIC7.36□□□□□ -1.23
Usp40Q8BWR4 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Usp40Q8BWR4 Gm45422-201ENSMUST00000211476 246 ntBASIC7.36□□□□□ -1.23
Usp40Q8BWR4 AC156795.1-201ENSMUST00000214655 414 ntBASIC7.36□□□□□ -1.23
Usp40Q8BWR4 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC7.36□□□□□ -1.23
Usp40Q8BWR4 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC7.36□□□□□ -1.23
Usp40Q8BWR4 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC7.36□□□□□ -1.23
Usp40Q8BWR4 Gm7240-201ENSMUST00000220769 664 ntBASIC7.36□□□□□ -1.23
Usp40Q8BWR4 AC123534.1-201ENSMUST00000224060 656 ntBASIC7.36□□□□□ -1.23
Usp40Q8BWR4 CT025686.1-201ENSMUST00000227592 438 ntBASIC7.36□□□□□ -1.23
Usp40Q8BWR4 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Usp40Q8BWR4 Gm22977-201ENSMUST00000082615 107 ntBASIC7.36□□□□□ -1.23
Usp40Q8BWR4 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Usp40Q8BWR4 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Usp40Q8BWR4 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Usp40Q8BWR4 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Usp40Q8BWR4 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Usp40Q8BWR4 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC7.36□□□□□ -1.23
Usp40Q8BWR4 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Usp40Q8BWR4 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Usp40Q8BWR4 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Usp40Q8BWR4 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
Usp40Q8BWR4 Gm42994-201ENSMUST00000195964 2549 ntBASIC7.36□□□□□ -1.23
Usp40Q8BWR4 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Usp40Q8BWR4 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Usp40Q8BWR4 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Usp40Q8BWR4 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Usp40Q8BWR4 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC7.36□□□□□ -1.23
Usp40Q8BWR4 Efcab7-201ENSMUST00000097959 1713 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Usp40Q8BWR4 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Usp40Q8BWR4 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Usp40Q8BWR4 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Usp40Q8BWR4 Gm44695-201ENSMUST00000205567 1631 ntBASIC7.35□□□□□ -1.23
Usp40Q8BWR4 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Usp40Q8BWR4 CT025556.1-201ENSMUST00000222965 1884 ntBASIC7.35□□□□□ -1.23
Usp40Q8BWR4 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Usp40Q8BWR4 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC7.35□□□□□ -1.23
Usp40Q8BWR4 Gm24170-201ENSMUST00000104124 133 ntBASIC7.35□□□□□ -1.23
Usp40Q8BWR4 Gm23294-201ENSMUST00000104150 164 ntBASIC7.35□□□□□ -1.23
Usp40Q8BWR4 n-R5s82-201ENSMUST00000104213 109 ntBASIC7.35□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms