Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Gm44091-201ENSMUST00000205212 649 ntBASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Gm5324-201ENSMUST00000208115 476 ntBASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 AC160970.1-201ENSMUST00000219311 475 ntBASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 CT030645.2-201ENSMUST00000224321 1012 ntBASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 AC131029.2-201ENSMUST00000226696 628 ntBASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 AC166574.3-201ENSMUST00000226725 367 ntBASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 AC113269.1-201ENSMUST00000227185 674 ntBASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Gm23345-201ENSMUST00000083817 150 ntBASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Gm42645-201ENSMUST00000201573 1627 ntBASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Gm38096-201ENSMUST00000193692 2389 ntBASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Gm44193-201ENSMUST00000204822 2523 ntBASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Gm44224-201ENSMUST00000204131 1463 ntBASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Gm25876-201ENSMUST00000104329 119 ntBASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Gm10936-201ENSMUST00000105264 252 ntBASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Gm8250-201ENSMUST00000117398 774 ntBASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Gm13672-201ENSMUST00000117554 459 ntBASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Gm12985-201ENSMUST00000118376 183 ntBASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Gm14769-201ENSMUST00000118590 432 ntBASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Gm11943-201ENSMUST00000119473 327 ntBASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Gm11484-201ENSMUST00000119808 338 ntBASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Gm15791-201ENSMUST00000120365 319 ntBASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Gm12007-201ENSMUST00000120978 597 ntBASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Gm14229-201ENSMUST00000121178 850 ntBASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Gm8648-201ENSMUST00000122457 221 ntBASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Gm12833-201ENSMUST00000136112 477 ntBASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Gm4997-201ENSMUST00000154056 360 ntBASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Gm26509-201ENSMUST00000180947 948 ntBASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Mir8118-201ENSMUST00000183962 129 ntBASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Gm20561-201ENSMUST00000188131 292 ntBASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Gm17777-201ENSMUST00000189740 1276 ntBASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Gm37111-201ENSMUST00000193250 634 ntBASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Gm5694-201ENSMUST00000195648 641 ntBASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Igkv4-73-201ENSMUST00000199760 358 ntBASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Gm2602-201ENSMUST00000202112 571 ntBASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Gm18838-201ENSMUST00000204855 886 ntBASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Gm3189-201ENSMUST00000205595 832 ntBASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Gm4083-201ENSMUST00000207158 451 ntBASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Gm5023-201ENSMUST00000217442 587 ntBASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 AC147782.1-201ENSMUST00000219169 475 ntBASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Gm18113-201ENSMUST00000220630 303 ntBASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Gm36262-201ENSMUST00000223274 499 ntBASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 CT009556.1-201ENSMUST00000227282 449 ntBASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Gm22364-201ENSMUST00000083097 98 ntBASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Sh3rf1Q69ZI1 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms