Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Gm22501-201ENSMUST00000158981 127 ntBASIC5.67□□□□□ -1.5
Ccdc88aQ5SNZ0 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm9294-201ENSMUST00000165198 789 ntBASIC5.67□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm27896-201ENSMUST00000175162 317 ntBASIC5.67□□□□□ -1.5
Ccdc88aQ5SNZ0 Stk-ps2-204ENSMUST00000187808 616 ntBASIC5.67□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm9134-201ENSMUST00000193186 551 ntBASIC5.67□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc88aQ5SNZ0 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc88aQ5SNZ0 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Ccdc88aQ5SNZ0 Mecom-201ENSMUST00000061088 348 ntBASIC5.67□□□□□ -1.5
Ccdc88aQ5SNZ0 Olfr881-201ENSMUST00000074611 948 ntBASIC5.67□□□□□ -1.5
Ccdc88aQ5SNZ0 Snord22-201ENSMUST00000083153 126 ntBASIC5.67□□□□□ -1.5
Ccdc88aQ5SNZ0 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc88aQ5SNZ0 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc88aQ5SNZ0 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc88aQ5SNZ0 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc88aQ5SNZ0 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
Ccdc88aQ5SNZ0 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm9408-201ENSMUST00000197375 1505 ntBASIC5.67□□□□□ -1.5
Ccdc88aQ5SNZ0 AC158981.2-201ENSMUST00000227565 1537 ntBASIC5.67□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc88aQ5SNZ0 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
Ccdc88aQ5SNZ0 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc88aQ5SNZ0 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Ccdc88aQ5SNZ0 AC121844.3-201ENSMUST00000219124 1785 ntBASIC5.67□□□□□ -1.5
Ccdc88aQ5SNZ0 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC5.67□□□□□ -1.5
Ccdc88aQ5SNZ0 AC158605.3-201ENSMUST00000218999 2538 ntBASIC5.67□□□□□ -1.5
Ccdc88aQ5SNZ0 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm11196-201ENSMUST00000119052 395 ntBASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm12820-201ENSMUST00000119233 342 ntBASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm12893-201ENSMUST00000121732 275 ntBASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm22211-201ENSMUST00000158097 156 ntBASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm6647-201ENSMUST00000170514 641 ntBASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm43604-201ENSMUST00000199799 705 ntBASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm32308-201ENSMUST00000203053 280 ntBASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm44650-201ENSMUST00000206929 194 ntBASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 AC161252.2-201ENSMUST00000224978 374 ntBASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 Snora52-201ENSMUST00000082732 137 ntBASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 Ccnb2-ps-202ENSMUST00000170898 2296 ntBASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm42535-201ENSMUST00000197312 1399 ntBASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm42843-201ENSMUST00000196328 3616 ntBASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 AC124579.1-201ENSMUST00000223468 2520 ntBASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm44144-201ENSMUST00000203683 1960 ntBASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm15799-201ENSMUST00000120899 289 ntBASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm14122-201ENSMUST00000122076 973 ntBASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm22343-201ENSMUST00000122648 286 ntBASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 AC120011.1-201ENSMUST00000202147 744 ntBASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm45209-201ENSMUST00000207122 353 ntBASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm18462-201ENSMUST00000208112 417 ntBASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm3816-201ENSMUST00000209803 433 ntBASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm43682-201ENSMUST00000202150 2090 ntBASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC5.66□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm44171-201ENSMUST00000203701 2109 ntBASIC5.65□□□□□ -1.5
Ccdc88aQ5SNZ0 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Ccdc88aQ5SNZ0 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Ccdc88aQ5SNZ0 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Ccdc88aQ5SNZ0 AC151904.4-201ENSMUST00000219868 1319 ntBASIC5.65□□□□□ -1.5
Ccdc88aQ5SNZ0 AC190403.1-201ENSMUST00000224515 1325 ntBASIC5.65□□□□□ -1.5
Ccdc88aQ5SNZ0 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
Ccdc88aQ5SNZ0 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
Ccdc88aQ5SNZ0 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.65□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm20276-201ENSMUST00000216122 2648 ntBASIC5.65□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm23178-201ENSMUST00000116782 95 ntBASIC5.65□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm12039-201ENSMUST00000118219 180 ntBASIC5.65□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm14610-201ENSMUST00000118358 966 ntBASIC5.65□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC5.65□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm22177-201ENSMUST00000175002 158 ntBASIC5.65□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm20614-201ENSMUST00000177106 632 ntBASIC5.65□□□□□ -1.5
Ccdc88aQ5SNZ0 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC5.65□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC5.65□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 107.5 ms