Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Upf3bQ3ULL6 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Upf3bQ3ULL6 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Upf3bQ3ULL6 Gm37558-201ENSMUST00000193684 2983 ntBASIC5.25□□□□□ -1.57
Upf3bQ3ULL6 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Upf3bQ3ULL6 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Upf3bQ3ULL6 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Upf3bQ3ULL6 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
Upf3bQ3ULL6 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Upf3bQ3ULL6 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Upf3bQ3ULL6 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Upf3bQ3ULL6 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Upf3bQ3ULL6 Gm45324-201ENSMUST00000211193 5638 ntBASIC5.24□□□□□ -1.57
Upf3bQ3ULL6 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Upf3bQ3ULL6 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Upf3bQ3ULL6 Gm37356-201ENSMUST00000193362 1613 ntBASIC5.24□□□□□ -1.57
Upf3bQ3ULL6 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Upf3bQ3ULL6 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC5.24□□□□□ -1.57
Upf3bQ3ULL6 Gm11822-201ENSMUST00000119177 415 ntBASIC5.24□□□□□ -1.57
Upf3bQ3ULL6 Gm13162-201ENSMUST00000121481 454 ntBASIC5.24□□□□□ -1.57
Upf3bQ3ULL6 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC5.24□□□□□ -1.57
Upf3bQ3ULL6 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Upf3bQ3ULL6 Gm23318-201ENSMUST00000158000 108 ntBASIC5.24□□□□□ -1.57
Upf3bQ3ULL6 Gm24931-201ENSMUST00000158324 107 ntBASIC5.24□□□□□ -1.57
Upf3bQ3ULL6 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Upf3bQ3ULL6 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Upf3bQ3ULL6 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC5.24□□□□□ -1.57
Upf3bQ3ULL6 Gm20614-201ENSMUST00000177106 632 ntBASIC5.24□□□□□ -1.57
Upf3bQ3ULL6 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Upf3bQ3ULL6 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC5.24□□□□□ -1.57
Upf3bQ3ULL6 CT025525.4-201ENSMUST00000227728 277 ntBASIC5.24□□□□□ -1.57
Upf3bQ3ULL6 AC125539.2-202ENSMUST00000227983 587 ntBASIC5.24□□□□□ -1.57
Upf3bQ3ULL6 AC125539.2-201ENSMUST00000228339 753 ntBASIC5.24□□□□□ -1.57
Upf3bQ3ULL6 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Upf3bQ3ULL6 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Upf3bQ3ULL6 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Upf3bQ3ULL6 Gm37250-201ENSMUST00000194919 2388 ntBASIC5.24□□□□□ -1.57
Upf3bQ3ULL6 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC5.24□□□□□ -1.57
Upf3bQ3ULL6 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Upf3bQ3ULL6 Gm43784-201ENSMUST00000202922 2436 ntBASIC5.24□□□□□ -1.57
Upf3bQ3ULL6 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Upf3bQ3ULL6 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Upf3bQ3ULL6 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Upf3bQ3ULL6 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC5.23□□□□□ -1.57
Upf3bQ3ULL6 Gm37311-201ENSMUST00000195541 2024 ntBASIC5.23□□□□□ -1.57
Upf3bQ3ULL6 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
Upf3bQ3ULL6 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Upf3bQ3ULL6 Gm44535-201ENSMUST00000208889 3136 ntBASIC5.23□□□□□ -1.57
Upf3bQ3ULL6 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Upf3bQ3ULL6 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC5.23□□□□□ -1.57
Upf3bQ3ULL6 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Upf3bQ3ULL6 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
Upf3bQ3ULL6 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Upf3bQ3ULL6 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC5.23□□□□□ -1.57
Upf3bQ3ULL6 Gm11196-201ENSMUST00000119052 395 ntBASIC5.23□□□□□ -1.57
Upf3bQ3ULL6 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC5.23□□□□□ -1.57
Upf3bQ3ULL6 Gm26153-201ENSMUST00000157433 127 ntBASIC5.23□□□□□ -1.57
Upf3bQ3ULL6 Gm23673-201ENSMUST00000157474 298 ntBASIC5.23□□□□□ -1.57
Upf3bQ3ULL6 Gm25383-201ENSMUST00000157810 144 ntBASIC5.23□□□□□ -1.57
Upf3bQ3ULL6 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC5.23□□□□□ -1.57
Upf3bQ3ULL6 Mir5103-201ENSMUST00000175111 79 ntBASIC5.23□□□□□ -1.57
Upf3bQ3ULL6 Gm22852-201ENSMUST00000177899 101 ntBASIC5.23□□□□□ -1.57
Upf3bQ3ULL6 Gm27355-201ENSMUST00000185045 128 ntBASIC5.23□□□□□ -1.57
Upf3bQ3ULL6 Gm18342-201ENSMUST00000186987 694 ntBASIC5.23□□□□□ -1.57
Upf3bQ3ULL6 Gm2427-201ENSMUST00000189121 881 ntBASIC5.23□□□□□ -1.57
Upf3bQ3ULL6 Gm5511-201ENSMUST00000189380 802 ntBASIC5.23□□□□□ -1.57
Upf3bQ3ULL6 Gm36983-201ENSMUST00000192280 1102 ntBASIC5.23□□□□□ -1.57
Upf3bQ3ULL6 Gm37123-201ENSMUST00000192994 1171 ntBASIC5.23□□□□□ -1.57
Upf3bQ3ULL6 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC5.23□□□□□ -1.57
Upf3bQ3ULL6 Gm2053-201ENSMUST00000195671 631 ntBASIC5.23□□□□□ -1.57
Upf3bQ3ULL6 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC5.23□□□□□ -1.57
Upf3bQ3ULL6 Gm8189-203ENSMUST00000211159 1225 ntBASIC5.23□□□□□ -1.57
Upf3bQ3ULL6 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC5.23□□□□□ -1.57
Upf3bQ3ULL6 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC5.23□□□□□ -1.57
Upf3bQ3ULL6 Prl7a1-203ENSMUST00000224852 1283 ntBASIC5.23□□□□□ -1.57
Upf3bQ3ULL6 AC154452.1-201ENSMUST00000225819 241 ntBASIC5.23□□□□□ -1.57
Upf3bQ3ULL6 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
Upf3bQ3ULL6 Gm25818-201ENSMUST00000083282 164 ntBASIC5.23□□□□□ -1.57
Upf3bQ3ULL6 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Upf3bQ3ULL6 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC5.23□□□□□ -1.57
Upf3bQ3ULL6 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Upf3bQ3ULL6 Gm43011-201ENSMUST00000197897 4433 ntBASIC5.23□□□□□ -1.57
Upf3bQ3ULL6 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC5.23□□□□□ -1.57
Upf3bQ3ULL6 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Upf3bQ3ULL6 Gm44171-201ENSMUST00000203701 2109 ntBASIC5.23□□□□□ -1.57
Upf3bQ3ULL6 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Upf3bQ3ULL6 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Upf3bQ3ULL6 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Upf3bQ3ULL6 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Upf3bQ3ULL6 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Upf3bQ3ULL6 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC5.22□□□□□ -1.57
Upf3bQ3ULL6 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Upf3bQ3ULL6 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Upf3bQ3ULL6 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Upf3bQ3ULL6 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC5.22□□□□□ -1.57
Upf3bQ3ULL6 Mir879-201ENSMUST00000104703 76 ntBASIC5.22□□□□□ -1.57
Upf3bQ3ULL6 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Upf3bQ3ULL6 Gm15670-201ENSMUST00000117740 447 ntBASIC5.22□□□□□ -1.57
Upf3bQ3ULL6 Gm14512-201ENSMUST00000117924 230 ntBASIC5.22□□□□□ -1.57
Upf3bQ3ULL6 Gm11346-201ENSMUST00000118346 704 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms