Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
Trafd1Q3UDK1 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Trafd1Q3UDK1 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trafd1Q3UDK1 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Trafd1Q3UDK1 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC4.92□□□□□ -1.62
Trafd1Q3UDK1 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
Trafd1Q3UDK1 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trafd1Q3UDK1 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Trafd1Q3UDK1 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Trafd1Q3UDK1 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Trafd1Q3UDK1 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Trafd1Q3UDK1 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Trafd1Q3UDK1 Gm42548-201ENSMUST00000202669 3933 ntBASIC4.92□□□□□ -1.62
Trafd1Q3UDK1 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trafd1Q3UDK1 Gm16149-201ENSMUST00000117631 309 ntBASIC4.92□□□□□ -1.62
Trafd1Q3UDK1 Gm8202-201ENSMUST00000117682 310 ntBASIC4.92□□□□□ -1.62
Trafd1Q3UDK1 Gm15357-201ENSMUST00000119160 285 ntBASIC4.92□□□□□ -1.62
Trafd1Q3UDK1 H3f3c-201ENSMUST00000119459 411 ntBASIC4.92□□□□□ -1.62
Trafd1Q3UDK1 Gm12287-201ENSMUST00000119770 707 ntBASIC4.92□□□□□ -1.62
Trafd1Q3UDK1 Gm15390-201ENSMUST00000120323 738 ntBASIC4.92□□□□□ -1.62
Trafd1Q3UDK1 Gm15227-201ENSMUST00000121844 399 ntBASIC4.92□□□□□ -1.62
Trafd1Q3UDK1 Gm13214-201ENSMUST00000122137 408 ntBASIC4.92□□□□□ -1.62
Trafd1Q3UDK1 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC4.92□□□□□ -1.62
Trafd1Q3UDK1 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC4.92□□□□□ -1.62
Trafd1Q3UDK1 Gm17711-201ENSMUST00000172028 237 ntBASIC4.92□□□□□ -1.62
Trafd1Q3UDK1 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Trafd1Q3UDK1 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC4.92□□□□□ -1.62
Trafd1Q3UDK1 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trafd1Q3UDK1 Gm9499-201ENSMUST00000180888 964 ntBASIC4.92□□□□□ -1.62
Trafd1Q3UDK1 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC4.92□□□□□ -1.62
Trafd1Q3UDK1 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC4.92□□□□□ -1.62
Trafd1Q3UDK1 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Trafd1Q3UDK1 Gm44485-201ENSMUST00000199569 137 ntBASIC4.92□□□□□ -1.62
Trafd1Q3UDK1 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trafd1Q3UDK1 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC4.92□□□□□ -1.62
Trafd1Q3UDK1 AC153840.1-201ENSMUST00000219685 313 ntBASIC4.92□□□□□ -1.62
Trafd1Q3UDK1 AC211878.5-201ENSMUST00000221697 409 ntBASIC4.92□□□□□ -1.62
Trafd1Q3UDK1 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC4.92□□□□□ -1.62
Trafd1Q3UDK1 AC153153.2-201ENSMUST00000223572 411 ntBASIC4.92□□□□□ -1.62
Trafd1Q3UDK1 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC4.92□□□□□ -1.62
Trafd1Q3UDK1 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Trafd1Q3UDK1 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Trafd1Q3UDK1 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
Trafd1Q3UDK1 Gm24706-201ENSMUST00000082806 137 ntBASIC4.92□□□□□ -1.62
Trafd1Q3UDK1 Mir342-201ENSMUST00000083502 99 ntBASIC4.92□□□□□ -1.62
Trafd1Q3UDK1 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Trafd1Q3UDK1 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Trafd1Q3UDK1 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Trafd1Q3UDK1 Gm2099-202ENSMUST00000223310 3341 ntBASIC4.92□□□□□ -1.62
Trafd1Q3UDK1 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Trafd1Q3UDK1 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trafd1Q3UDK1 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Trafd1Q3UDK1 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Trafd1Q3UDK1 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC4.91□□□□□ -1.62
Trafd1Q3UDK1 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC4.91□□□□□ -1.62
Trafd1Q3UDK1 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Trafd1Q3UDK1 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Trafd1Q3UDK1 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC4.91□□□□□ -1.62
Trafd1Q3UDK1 Gm13491-201ENSMUST00000118267 235 ntBASIC4.91□□□□□ -1.62
Trafd1Q3UDK1 Gm12734-201ENSMUST00000120228 948 ntBASIC4.91□□□□□ -1.62
Trafd1Q3UDK1 Gm24382-201ENSMUST00000122698 107 ntBASIC4.91□□□□□ -1.62
Trafd1Q3UDK1 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC4.91□□□□□ -1.62
Trafd1Q3UDK1 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Trafd1Q3UDK1 Gm24931-201ENSMUST00000158324 107 ntBASIC4.91□□□□□ -1.62
Trafd1Q3UDK1 Gm21999-201ENSMUST00000165985 387 ntBASIC4.91□□□□□ -1.62
Trafd1Q3UDK1 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC4.91□□□□□ -1.62
Trafd1Q3UDK1 Gm28389-201ENSMUST00000190090 697 ntBASIC4.91□□□□□ -1.62
Trafd1Q3UDK1 Gm18426-201ENSMUST00000191874 973 ntBASIC4.91□□□□□ -1.62
Trafd1Q3UDK1 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC4.91□□□□□ -1.62
Trafd1Q3UDK1 Gm37490-201ENSMUST00000195566 724 ntBASIC4.91□□□□□ -1.62
Trafd1Q3UDK1 Gm2053-201ENSMUST00000195671 631 ntBASIC4.91□□□□□ -1.62
Trafd1Q3UDK1 Gm37102-201ENSMUST00000195740 1105 ntBASIC4.91□□□□□ -1.62
Trafd1Q3UDK1 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC4.91□□□□□ -1.62
Trafd1Q3UDK1 Gm32536-201ENSMUST00000205209 445 ntBASIC4.91□□□□□ -1.62
Trafd1Q3UDK1 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Trafd1Q3UDK1 Gm19201-201ENSMUST00000210127 778 ntBASIC4.91□□□□□ -1.62
Trafd1Q3UDK1 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC4.91□□□□□ -1.62
Trafd1Q3UDK1 Gm18363-201ENSMUST00000221671 730 ntBASIC4.91□□□□□ -1.62
Trafd1Q3UDK1 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC4.91□□□□□ -1.62
Trafd1Q3UDK1 AC116724.1-201ENSMUST00000227900 972 ntBASIC4.91□□□□□ -1.62
Trafd1Q3UDK1 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC4.91□□□□□ -1.62
Trafd1Q3UDK1 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Trafd1Q3UDK1 Gm26063-201ENSMUST00000083378 107 ntBASIC4.91□□□□□ -1.62
Trafd1Q3UDK1 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Trafd1Q3UDK1 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Trafd1Q3UDK1 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Trafd1Q3UDK1 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Trafd1Q3UDK1 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Trafd1Q3UDK1 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Trafd1Q3UDK1 AC154573.1-201ENSMUST00000225913 4659 ntBASIC4.91□□□□□ -1.62
Trafd1Q3UDK1 AC139218.1-201ENSMUST00000228215 4287 ntBASIC4.91□□□□□ -1.62
Trafd1Q3UDK1 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC4.91□□□□□ -1.62
Trafd1Q3UDK1 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.62
Trafd1Q3UDK1 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Trafd1Q3UDK1 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Trafd1Q3UDK1 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC4.9□□□□□ -1.62
Trafd1Q3UDK1 AC127371.2-201ENSMUST00000228108 1933 ntBASIC4.9□□□□□ -1.62
Trafd1Q3UDK1 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Trafd1Q3UDK1 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Trafd1Q3UDK1 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 101.3 ms