Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Gm29061-201ENSMUST00000185900 1499 ntTSL 5 BASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 Gm29321-201ENSMUST00000186727 1499 ntTSL 5 BASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 Gm11447-201ENSMUST00000118983 858 ntBASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 Klra11-ps-201ENSMUST00000122033 810 ntBASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 Gm27360-201ENSMUST00000183487 80 ntBASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 Gm27332-201ENSMUST00000184893 112 ntBASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 Gm29545-201ENSMUST00000188878 694 ntBASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 Gm7804-202ENSMUST00000194187 854 ntBASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 Ighv8-3-201ENSMUST00000194985 295 ntBASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 Gm43561-201ENSMUST00000199866 448 ntBASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 Gm8556-201ENSMUST00000210437 664 ntBASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 Gm19232-201ENSMUST00000211621 652 ntBASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 AC155709.1-201ENSMUST00000218794 162 ntBASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 Olfr790-204ENSMUST00000218901 1070 ntBASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 Gm17849-201ENSMUST00000219788 853 ntBASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 AC079644.2-201ENSMUST00000220581 322 ntBASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 Gm7252-201ENSMUST00000223284 456 ntBASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 AC129935.1-201ENSMUST00000226302 873 ntBASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 AC117202.3-201ENSMUST00000228532 310 ntBASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 n-R5s196-201ENSMUST00000083136 117 ntBASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Ccbe1Q3MI99 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Ccbe1Q3MI99 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC5.4□□□□□ -1.55
Ccbe1Q3MI99 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Ccbe1Q3MI99 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Ccbe1Q3MI99 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Ccbe1Q3MI99 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
Ccbe1Q3MI99 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Ccbe1Q3MI99 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Ccbe1Q3MI99 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC5.4□□□□□ -1.55
Ccbe1Q3MI99 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Ccbe1Q3MI99 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Ccbe1Q3MI99 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ccbe1Q3MI99 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC5.39□□□□□ -1.55
Ccbe1Q3MI99 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Ccbe1Q3MI99 AC147639.2-202ENSMUST00000224834 1545 ntBASIC5.39□□□□□ -1.55
Ccbe1Q3MI99 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Ccbe1Q3MI99 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ccbe1Q3MI99 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
Ccbe1Q3MI99 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ccbe1Q3MI99 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Ccbe1Q3MI99 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ccbe1Q3MI99 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC5.39□□□□□ -1.55
Ccbe1Q3MI99 Gm26417-201ENSMUST00000104274 135 ntBASIC5.39□□□□□ -1.55
Ccbe1Q3MI99 Gm25379-201ENSMUST00000104338 114 ntBASIC5.39□□□□□ -1.55
Ccbe1Q3MI99 Gm2178-201ENSMUST00000104927 357 ntBASIC5.39□□□□□ -1.55
Ccbe1Q3MI99 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ccbe1Q3MI99 Gm15159-201ENSMUST00000117062 764 ntBASIC5.39□□□□□ -1.55
Ccbe1Q3MI99 Gm12653-201ENSMUST00000117778 561 ntBASIC5.39□□□□□ -1.55
Ccbe1Q3MI99 Gm14729-201ENSMUST00000118373 689 ntBASIC5.39□□□□□ -1.55
Ccbe1Q3MI99 Gm12090-201ENSMUST00000118692 758 ntBASIC5.39□□□□□ -1.55
Ccbe1Q3MI99 Gm8855-201ENSMUST00000118888 878 ntBASIC5.39□□□□□ -1.55
Ccbe1Q3MI99 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC5.39□□□□□ -1.55
Ccbe1Q3MI99 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC5.39□□□□□ -1.55
Ccbe1Q3MI99 Gm13484-201ENSMUST00000120738 412 ntBASIC5.39□□□□□ -1.55
Ccbe1Q3MI99 Gm14979-201ENSMUST00000121561 1035 ntBASIC5.39□□□□□ -1.55
Ccbe1Q3MI99 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC5.39□□□□□ -1.55
Ccbe1Q3MI99 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC5.39□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 92.6 ms