Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC6.06□□□□□ -1.44
Sox9Q04887 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sox9Q04887 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
Sox9Q04887 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Sox9Q04887 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Sox9Q04887 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC6.06□□□□□ -1.44
Sox9Q04887 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Sox9Q04887 AC162936.1-201ENSMUST00000223676 2368 ntBASIC6.06□□□□□ -1.44
Sox9Q04887 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC6.06□□□□□ -1.44
Sox9Q04887 Gm15660-201ENSMUST00000118997 478 ntBASIC6.06□□□□□ -1.44
Sox9Q04887 Gm14360-201ENSMUST00000120670 393 ntBASIC6.06□□□□□ -1.44
Sox9Q04887 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC6.06□□□□□ -1.44
Sox9Q04887 Gm11677-201ENSMUST00000121349 977 ntBASIC6.06□□□□□ -1.44
Sox9Q04887 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC6.06□□□□□ -1.44
Sox9Q04887 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Sox9Q04887 Gm26310-201ENSMUST00000157766 117 ntBASIC6.06□□□□□ -1.44
Sox9Q04887 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC6.06□□□□□ -1.44
Sox9Q04887 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC6.06□□□□□ -1.44
Sox9Q04887 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC6.06□□□□□ -1.44
Sox9Q04887 Gm37774-201ENSMUST00000194401 245 ntBASIC6.06□□□□□ -1.44
Sox9Q04887 Igkv2-107-201ENSMUST00000196000 313 ntBASIC6.06□□□□□ -1.44
Sox9Q04887 Gm18702-201ENSMUST00000196923 588 ntBASIC6.06□□□□□ -1.44
Sox9Q04887 Mir142-201ENSMUST00000198092 64 ntBASIC6.06□□□□□ -1.44
Sox9Q04887 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC6.06□□□□□ -1.44
Sox9Q04887 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
Sox9Q04887 Gm4874-201ENSMUST00000203589 691 ntBASIC6.06□□□□□ -1.44
Sox9Q04887 Gm44135-201ENSMUST00000205221 368 ntBASIC6.06□□□□□ -1.44
Sox9Q04887 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC6.06□□□□□ -1.44
Sox9Q04887 Gm18863-201ENSMUST00000217004 1299 ntBASIC6.06□□□□□ -1.44
Sox9Q04887 Gm7042-201ENSMUST00000223027 384 ntBASIC6.06□□□□□ -1.44
Sox9Q04887 AC131745.1-201ENSMUST00000223660 330 ntBASIC6.06□□□□□ -1.44
Sox9Q04887 AC154724.1-201ENSMUST00000225782 821 ntBASIC6.06□□□□□ -1.44
Sox9Q04887 AC123061.2-201ENSMUST00000226234 802 ntBASIC6.06□□□□□ -1.44
Sox9Q04887 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sox9Q04887 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sox9Q04887 n-R5s86-201ENSMUST00000083215 119 ntBASIC6.06□□□□□ -1.44
Sox9Q04887 Mir342-201ENSMUST00000083502 99 ntBASIC6.06□□□□□ -1.44
Sox9Q04887 Mir16-2-201ENSMUST00000083672 95 ntBASIC6.06□□□□□ -1.44
Sox9Q04887 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC6.06□□□□□ -1.44
Sox9Q04887 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC6.06□□□□□ -1.44
Sox9Q04887 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC6.06□□□□□ -1.44
Sox9Q04887 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Sox9Q04887 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Sox9Q04887 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC6.06□□□□□ -1.44
Sox9Q04887 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Sox9Q04887 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC6.06□□□□□ -1.44
Sox9Q04887 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Sox9Q04887 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Sox9Q04887 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Sox9Q04887 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Sox9Q04887 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sox9Q04887 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC6.06□□□□□ -1.44
Sox9Q04887 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Sox9Q04887 Gm37342-201ENSMUST00000194588 4965 ntBASIC6.05□□□□□ -1.44
Sox9Q04887 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Sox9Q04887 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Sox9Q04887 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Sox9Q04887 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
Sox9Q04887 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Sox9Q04887 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC6.05□□□□□ -1.44
Sox9Q04887 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Sox9Q04887 Gm24578-201ENSMUST00000103970 129 ntBASIC6.05□□□□□ -1.44
Sox9Q04887 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Sox9Q04887 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Sox9Q04887 Gm13681-201ENSMUST00000117925 210 ntBASIC6.05□□□□□ -1.44
Sox9Q04887 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC6.05□□□□□ -1.44
Sox9Q04887 Gm12825-201ENSMUST00000120249 563 ntBASIC6.05□□□□□ -1.44
Sox9Q04887 Gm16412-201ENSMUST00000121602 273 ntBASIC6.05□□□□□ -1.44
Sox9Q04887 Gm13471-201ENSMUST00000122057 433 ntBASIC6.05□□□□□ -1.44
Sox9Q04887 Gm12488-201ENSMUST00000122449 499 ntBASIC6.05□□□□□ -1.44
Sox9Q04887 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC6.05□□□□□ -1.44
Sox9Q04887 Gm14349-201ENSMUST00000137155 902 ntBASIC6.05□□□□□ -1.44
Sox9Q04887 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC6.05□□□□□ -1.44
Sox9Q04887 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Sox9Q04887 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Sox9Q04887 Gm10177-202ENSMUST00000161698 207 ntBASIC6.05□□□□□ -1.44
Sox9Q04887 Gm3216-201ENSMUST00000166927 486 ntBASIC6.05□□□□□ -1.44
Sox9Q04887 Gm3141-201ENSMUST00000168726 499 ntBASIC6.05□□□□□ -1.44
Sox9Q04887 Spanxn4-201ENSMUST00000172433 424 ntBASIC6.05□□□□□ -1.44
Sox9Q04887 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC6.05□□□□□ -1.44
Sox9Q04887 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC6.05□□□□□ -1.44
Sox9Q04887 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Sox9Q04887 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC6.05□□□□□ -1.44
Sox9Q04887 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC6.05□□□□□ -1.44
Sox9Q04887 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC6.05□□□□□ -1.44
Sox9Q04887 Gm37433-201ENSMUST00000192695 678 ntBASIC6.05□□□□□ -1.44
Sox9Q04887 Gm37441-201ENSMUST00000194430 678 ntBASIC6.05□□□□□ -1.44
Sox9Q04887 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC6.05□□□□□ -1.44
Sox9Q04887 Gm43436-201ENSMUST00000199308 147 ntBASIC6.05□□□□□ -1.44
Sox9Q04887 Gm38395-201ENSMUST00000199904 830 ntBASIC6.05□□□□□ -1.44
Sox9Q04887 Igkv13-82-201ENSMUST00000200308 346 ntBASIC6.05□□□□□ -1.44
Sox9Q04887 Gm43198-201ENSMUST00000200927 326 ntBASIC6.05□□□□□ -1.44
Sox9Q04887 Gm5318-201ENSMUST00000205249 406 ntBASIC6.05□□□□□ -1.44
Sox9Q04887 Gm17987-201ENSMUST00000206902 603 ntBASIC6.05□□□□□ -1.44
Sox9Q04887 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC6.05□□□□□ -1.44
Sox9Q04887 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC6.05□□□□□ -1.44
Sox9Q04887 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC6.05□□□□□ -1.44
Sox9Q04887 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC6.05□□□□□ -1.44
Sox9Q04887 AC129935.1-201ENSMUST00000226302 873 ntBASIC6.05□□□□□ -1.44
Sox9Q04887 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms