Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm16463-201ENSMUST00000120527 721 ntBASIC3.25□□□□□ -1.89
PrkdcP97313 Gm38201-201ENSMUST00000192143 387 ntBASIC3.25□□□□□ -1.89
PrkdcP97313 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC3.25□□□□□ -1.89
PrkdcP97313 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC3.25□□□□□ -1.89
PrkdcP97313 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
PrkdcP97313 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
PrkdcP97313 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PrkdcP97313 BC024978-201ENSMUST00000108379 7247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
PrkdcP97313 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
PrkdcP97313 Ptprj-201ENSMUST00000111493 7124 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
PrkdcP97313 Gm19666-201ENSMUST00000198176 1893 ntBASIC3.25□□□□□ -1.89
PrkdcP97313 AC130827.1-201ENSMUST00000220476 3850 ntBASIC3.25□□□□□ -1.89
PrkdcP97313 Gm6162-201ENSMUST00000194870 2930 ntBASIC3.25□□□□□ -1.89
PrkdcP97313 Wdfy4-202ENSMUST00000130509 10158 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
PrkdcP97313 Gm37588-201ENSMUST00000195024 2496 ntBASIC3.25□□□□□ -1.89
PrkdcP97313 Prpf8-202ENSMUST00000102510 7249 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
PrkdcP97313 Akap2-201ENSMUST00000043456 7211 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PrkdcP97313 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PrkdcP97313 Slfn5-201ENSMUST00000067443 5979 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PrkdcP97313 Gm43022-201ENSMUST00000197067 4268 ntBASIC3.25□□□□□ -1.89
PrkdcP97313 Glce-201ENSMUST00000034785 4626 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PrkdcP97313 Gm24127-201ENSMUST00000104110 130 ntBASIC3.25□□□□□ -1.89
PrkdcP97313 Gm14776-201ENSMUST00000121029 887 ntBASIC3.25□□□□□ -1.89
PrkdcP97313 Gm14500-201ENSMUST00000121647 113 ntBASIC3.25□□□□□ -1.89
PrkdcP97313 Gm29793-201ENSMUST00000202874 460 ntBASIC3.25□□□□□ -1.89
PrkdcP97313 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PrkdcP97313 Gm37834-201ENSMUST00000194517 3035 ntBASIC3.25□□□□□ -1.89
PrkdcP97313 Vezt-201ENSMUST00000047711 4479 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
PrkdcP97313 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
PrkdcP97313 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
PrkdcP97313 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
PrkdcP97313 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
PrkdcP97313 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
PrkdcP97313 Unc79-201ENSMUST00000085079 7762 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
PrkdcP97313 Cfap46-202ENSMUST00000129990 8180 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
PrkdcP97313 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC3.24□□□□□ -1.89
PrkdcP97313 Erc1-210ENSMUST00000184864 5428 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
PrkdcP97313 Usp54-201ENSMUST00000022356 6580 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
PrkdcP97313 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PrkdcP97313 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
PrkdcP97313 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC3.24□□□□□ -1.89
PrkdcP97313 Rbbp6-201ENSMUST00000052135 6184 ntAPPRIS P2 TSL 5 BASIC3.24□□□□□ -1.89
PrkdcP97313 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
PrkdcP97313 Gm13506-201ENSMUST00000120391 1083 ntBASIC3.24□□□□□ -1.89
PrkdcP97313 Gm25104-201ENSMUST00000122476 163 ntBASIC3.24□□□□□ -1.89
PrkdcP97313 Gm3160-201ENSMUST00000128343 607 ntBASIC3.24□□□□□ -1.89
PrkdcP97313 Gm22569-201ENSMUST00000175545 124 ntBASIC3.24□□□□□ -1.89
PrkdcP97313 Gm8919-201ENSMUST00000182028 1014 ntBASIC3.24□□□□□ -1.89
PrkdcP97313 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC3.24□□□□□ -1.89
PrkdcP97313 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC3.24□□□□□ -1.89
PrkdcP97313 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PrkdcP97313 Gm8939-201ENSMUST00000192577 964 ntBASIC3.24□□□□□ -1.89
PrkdcP97313 Gm37164-201ENSMUST00000192809 637 ntBASIC3.24□□□□□ -1.89
PrkdcP97313 Gm37243-201ENSMUST00000193407 595 ntBASIC3.24□□□□□ -1.89
PrkdcP97313 Gm8790-201ENSMUST00000194108 322 ntBASIC3.24□□□□□ -1.89
PrkdcP97313 Gm9245-201ENSMUST00000200528 983 ntBASIC3.24□□□□□ -1.89
PrkdcP97313 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PrkdcP97313 AC156504.1-201ENSMUST00000214608 157 ntBASIC3.24□□□□□ -1.89
PrkdcP97313 Gm3213-201ENSMUST00000219296 441 ntBASIC3.24□□□□□ -1.89
PrkdcP97313 Map1a-201ENSMUST00000094639 11825 ntAPPRIS P3 TSL 5 BASIC3.24□□□□□ -1.89
PrkdcP97313 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
PrkdcP97313 AC154354.1-201ENSMUST00000224585 2109 ntBASIC3.24□□□□□ -1.89
PrkdcP97313 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PrkdcP97313 Gm13477-201ENSMUST00000121620 2687 ntBASIC3.24□□□□□ -1.89
PrkdcP97313 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC3.24□□□□□ -1.89
PrkdcP97313 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC3.24□□□□□ -1.89
PrkdcP97313 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PrkdcP97313 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
PrkdcP97313 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
PrkdcP97313 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PrkdcP97313 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC3.24□□□□□ -1.89
PrkdcP97313 Gm44027-201ENSMUST00000203419 3480 ntBASIC3.24□□□□□ -1.89
PrkdcP97313 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PrkdcP97313 AC103672.2-201ENSMUST00000228146 1687 ntBASIC3.24□□□□□ -1.89
PrkdcP97313 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC3.24□□□□□ -1.89
PrkdcP97313 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
PrkdcP97313 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC3.24□□□□□ -1.89
PrkdcP97313 Gm13249-201ENSMUST00000177803 345 ntBASIC3.24□□□□□ -1.89
PrkdcP97313 Gm13144-201ENSMUST00000179385 345 ntBASIC3.24□□□□□ -1.89
PrkdcP97313 Gm29045-201ENSMUST00000187278 698 ntBASIC3.24□□□□□ -1.89
PrkdcP97313 Gm44816-201ENSMUST00000206666 477 ntBASIC3.24□□□□□ -1.89
PrkdcP97313 Gm18487-201ENSMUST00000215826 878 ntBASIC3.24□□□□□ -1.89
PrkdcP97313 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PrkdcP97313 Gm37357-201ENSMUST00000192386 3123 ntBASIC3.24□□□□□ -1.89
PrkdcP97313 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PrkdcP97313 Gm42510-201ENSMUST00000196470 2258 ntBASIC3.24□□□□□ -1.89
PrkdcP97313 Sox6-202ENSMUST00000106612 8193 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
PrkdcP97313 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC3.24□□□□□ -1.89
PrkdcP97313 Gm15151-201ENSMUST00000117106 177 ntBASIC3.24□□□□□ -1.89
PrkdcP97313 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC3.24□□□□□ -1.89
PrkdcP97313 Gm16106-201ENSMUST00000119187 294 ntBASIC3.24□□□□□ -1.89
PrkdcP97313 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC3.24□□□□□ -1.89
PrkdcP97313 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
PrkdcP97313 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PrkdcP97313 Gm43436-201ENSMUST00000199308 147 ntBASIC3.24□□□□□ -1.89
PrkdcP97313 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC3.24□□□□□ -1.89
PrkdcP97313 AC121978.1-201ENSMUST00000228357 380 ntBASIC3.24□□□□□ -1.89
PrkdcP97313 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PrkdcP97313 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC3.24□□□□□ -1.89
PrkdcP97313 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms