Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CiitaP79621 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC5.6□□□□□ -1.51
CiitaP79621 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC5.6□□□□□ -1.51
CiitaP79621 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CiitaP79621 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CiitaP79621 Gm14046-201ENSMUST00000119389 509 ntBASIC5.6□□□□□ -1.51
CiitaP79621 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC5.6□□□□□ -1.51
CiitaP79621 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CiitaP79621 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CiitaP79621 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CiitaP79621 Gm3091-201ENSMUST00000163408 484 ntBASIC5.6□□□□□ -1.51
CiitaP79621 Mir7006-201ENSMUST00000183624 69 ntBASIC5.6□□□□□ -1.51
CiitaP79621 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC5.6□□□□□ -1.51
CiitaP79621 Gm28962-201ENSMUST00000187993 621 ntTSL 5 BASIC5.6□□□□□ -1.51
CiitaP79621 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC5.6□□□□□ -1.51
CiitaP79621 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CiitaP79621 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC5.6□□□□□ -1.51
CiitaP79621 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CiitaP79621 Gm44307-201ENSMUST00000204466 764 ntBASIC5.6□□□□□ -1.51
CiitaP79621 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC5.6□□□□□ -1.51
CiitaP79621 Gm45701-201ENSMUST00000212049 235 ntBASIC5.6□□□□□ -1.51
CiitaP79621 Gm21112-201ENSMUST00000212224 578 ntBASIC5.6□□□□□ -1.51
CiitaP79621 Gm7760-201ENSMUST00000212265 578 ntBASIC5.6□□□□□ -1.51
CiitaP79621 Gm7807-201ENSMUST00000212475 578 ntBASIC5.6□□□□□ -1.51
CiitaP79621 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC5.6□□□□□ -1.51
CiitaP79621 AC122924.1-201ENSMUST00000222044 163 ntBASIC5.6□□□□□ -1.51
CiitaP79621 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CiitaP79621 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CiitaP79621 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
CiitaP79621 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CiitaP79621 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CiitaP79621 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC5.59□□□□□ -1.51
CiitaP79621 Gm37356-201ENSMUST00000193362 1613 ntBASIC5.59□□□□□ -1.51
CiitaP79621 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CiitaP79621 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CiitaP79621 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CiitaP79621 Gm6503-201ENSMUST00000210829 2225 ntBASIC5.59□□□□□ -1.51
CiitaP79621 Gm37370-201ENSMUST00000191996 1410 ntBASIC5.59□□□□□ -1.51
CiitaP79621 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
CiitaP79621 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CiitaP79621 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CiitaP79621 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC5.59□□□□□ -1.51
CiitaP79621 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CiitaP79621 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC5.59□□□□□ -1.51
CiitaP79621 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
CiitaP79621 Gm11486-201ENSMUST00000107322 478 ntBASIC5.59□□□□□ -1.51
CiitaP79621 Gm12685-201ENSMUST00000121702 214 ntBASIC5.59□□□□□ -1.51
CiitaP79621 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC5.59□□□□□ -1.51
CiitaP79621 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC5.59□□□□□ -1.51
CiitaP79621 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CiitaP79621 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CiitaP79621 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CiitaP79621 Gm6673-201ENSMUST00000166114 700 ntBASIC5.59□□□□□ -1.51
CiitaP79621 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CiitaP79621 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC5.59□□□□□ -1.51
CiitaP79621 Gm22355-201ENSMUST00000175531 96 ntBASIC5.59□□□□□ -1.51
CiitaP79621 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CiitaP79621 Gm21241-201ENSMUST00000179551 934 ntBASIC5.59□□□□□ -1.51
CiitaP79621 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CiitaP79621 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CiitaP79621 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CiitaP79621 Gm28439-201ENSMUST00000187714 876 ntBASIC5.59□□□□□ -1.51
CiitaP79621 Gm28976-201ENSMUST00000188070 144 ntBASIC5.59□□□□□ -1.51
CiitaP79621 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CiitaP79621 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CiitaP79621 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CiitaP79621 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CiitaP79621 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CiitaP79621 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CiitaP79621 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC5.59□□□□□ -1.51
CiitaP79621 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CiitaP79621 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CiitaP79621 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CiitaP79621 Gm20819-201ENSMUST00000191091 925 ntBASIC5.59□□□□□ -1.51
CiitaP79621 Gm20871-201ENSMUST00000191322 931 ntBASIC5.59□□□□□ -1.51
CiitaP79621 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CiitaP79621 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CiitaP79621 Gm37629-201ENSMUST00000193635 1050 ntBASIC5.59□□□□□ -1.51
CiitaP79621 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CiitaP79621 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC5.59□□□□□ -1.51
CiitaP79621 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC5.59□□□□□ -1.51
CiitaP79621 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CiitaP79621 Gm45722-201ENSMUST00000213075 466 ntBASIC5.59□□□□□ -1.51
CiitaP79621 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CiitaP79621 AC153961.2-201ENSMUST00000218877 164 ntBASIC5.59□□□□□ -1.51
CiitaP79621 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC5.59□□□□□ -1.51
CiitaP79621 AC122301.1-201ENSMUST00000219625 507 ntBASIC5.59□□□□□ -1.51
CiitaP79621 AC124549.1-201ENSMUST00000225912 333 ntBASIC5.59□□□□□ -1.51
CiitaP79621 n-R5s170-201ENSMUST00000083726 113 ntBASIC5.59□□□□□ -1.51
CiitaP79621 Olfr654-201ENSMUST00000098173 1155 ntBASIC5.59□□□□□ -1.51
CiitaP79621 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CiitaP79621 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC5.59□□□□□ -1.51
CiitaP79621 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CiitaP79621 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.52
CiitaP79621 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CiitaP79621 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
CiitaP79621 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
CiitaP79621 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
CiitaP79621 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CiitaP79621 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms