Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm26172-201ENSMUST00000158421 134 ntBASIC6.42□□□□□ -1.38
Sox1P53783 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC6.42□□□□□ -1.38
Sox1P53783 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Sox1P53783 Gm3933-201ENSMUST00000195391 439 ntBASIC6.42□□□□□ -1.38
Sox1P53783 Gm20940-201ENSMUST00000197308 360 ntBASIC6.42□□□□□ -1.38
Sox1P53783 Gm44465-201ENSMUST00000199536 114 ntBASIC6.42□□□□□ -1.38
Sox1P53783 Gm43176-201ENSMUST00000199653 2989 ntBASIC6.42□□□□□ -1.38
Sox1P53783 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC6.42□□□□□ -1.38
Sox1P53783 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Sox1P53783 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC6.42□□□□□ -1.38
Sox1P53783 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Sox1P53783 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Sox1P53783 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC6.42□□□□□ -1.38
Sox1P53783 Gm18113-201ENSMUST00000220630 303 ntBASIC6.42□□□□□ -1.38
Sox1P53783 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Sox1P53783 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC6.42□□□□□ -1.38
Sox1P53783 AL807824.1-201ENSMUST00000223151 183 ntBASIC6.42□□□□□ -1.38
Sox1P53783 AC154257.2-201ENSMUST00000224166 340 ntBASIC6.42□□□□□ -1.38
Sox1P53783 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC6.42□□□□□ -1.38
Sox1P53783 Mir30b-201ENSMUST00000083542 96 ntBASIC6.42□□□□□ -1.38
Sox1P53783 Defa-ps18-201ENSMUST00000098889 371 ntBASIC6.42□□□□□ -1.38
Sox1P53783 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sox1P53783 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sox1P53783 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sox1P53783 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Sox1P53783 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Sox1P53783 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Sox1P53783 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Sox1P53783 Gm336-201ENSMUST00000186376 1480 ntBASIC6.41□□□□□ -1.38
Sox1P53783 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Sox1P53783 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC6.41□□□□□ -1.38
Sox1P53783 Gm42520-201ENSMUST00000199642 1502 ntBASIC6.41□□□□□ -1.38
Sox1P53783 Gm18853-201ENSMUST00000183629 3596 ntBASIC6.41□□□□□ -1.38
Sox1P53783 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Sox1P53783 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Sox1P53783 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Sox1P53783 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC6.41□□□□□ -1.38
Sox1P53783 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Sox1P53783 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Sox1P53783 Gm42772-201ENSMUST00000199945 3041 ntBASIC6.41□□□□□ -1.38
Sox1P53783 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Sox1P53783 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Sox1P53783 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Sox1P53783 Gm24273-201ENSMUST00000102332 164 ntBASIC6.41□□□□□ -1.38
Sox1P53783 Gm14755-201ENSMUST00000118037 384 ntBASIC6.41□□□□□ -1.38
Sox1P53783 Gm12717-201ENSMUST00000118427 983 ntBASIC6.41□□□□□ -1.38
Sox1P53783 Gm14991-201ENSMUST00000119913 598 ntBASIC6.41□□□□□ -1.38
Sox1P53783 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC6.41□□□□□ -1.38
Sox1P53783 Gm6067-201ENSMUST00000121648 491 ntBASIC6.41□□□□□ -1.38
Sox1P53783 Gm26357-201ENSMUST00000158218 115 ntBASIC6.41□□□□□ -1.38
Sox1P53783 Gm25655-201ENSMUST00000158465 290 ntBASIC6.41□□□□□ -1.38
Sox1P53783 Gm16269-201ENSMUST00000160532 409 ntBASIC6.41□□□□□ -1.38
Sox1P53783 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Sox1P53783 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC6.41□□□□□ -1.38
Sox1P53783 Mirt2-201ENSMUST00000175179 285 ntBASIC6.41□□□□□ -1.38
Sox1P53783 Gm26925-201ENSMUST00000182470 957 ntBASIC6.41□□□□□ -1.38
Sox1P53783 Gm27543-201ENSMUST00000183562 177 ntBASIC6.41□□□□□ -1.38
Sox1P53783 Mir7687-201ENSMUST00000184722 59 ntBASIC6.41□□□□□ -1.38
Sox1P53783 Gm18969-201ENSMUST00000189423 730 ntBASIC6.41□□□□□ -1.38
Sox1P53783 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC6.41□□□□□ -1.38
Sox1P53783 Gm37341-201ENSMUST00000194680 371 ntBASIC6.41□□□□□ -1.38
Sox1P53783 Gm43370-201ENSMUST00000196437 284 ntBASIC6.41□□□□□ -1.38
Sox1P53783 Gm42924-201ENSMUST00000197261 185 ntBASIC6.41□□□□□ -1.38
Sox1P53783 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Sox1P53783 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC6.41□□□□□ -1.38
Sox1P53783 Gm18863-201ENSMUST00000217004 1299 ntBASIC6.41□□□□□ -1.38
Sox1P53783 AC131677.1-201ENSMUST00000218721 535 ntBASIC6.41□□□□□ -1.38
Sox1P53783 AC156802.1-201ENSMUST00000223623 579 ntBASIC6.41□□□□□ -1.38
Sox1P53783 AC131745.1-201ENSMUST00000223660 330 ntBASIC6.41□□□□□ -1.38
Sox1P53783 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Sox1P53783 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Sox1P53783 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Sox1P53783 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Sox1P53783 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Sox1P53783 n-R5s215-201ENSMUST00000082480 104 ntBASIC6.41□□□□□ -1.38
Sox1P53783 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC6.41□□□□□ -1.38
Sox1P53783 Gm30698-201ENSMUST00000214789 3198 ntBASIC6.41□□□□□ -1.38
Sox1P53783 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Sox1P53783 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC6.41□□□□□ -1.38
Sox1P53783 Gm8276-201ENSMUST00000192231 1812 ntBASIC6.41□□□□□ -1.38
Sox1P53783 Gm42898-201ENSMUST00000200370 3073 ntBASIC6.41□□□□□ -1.38
Sox1P53783 Gm43398-201ENSMUST00000196584 2742 ntBASIC6.41□□□□□ -1.38
Sox1P53783 Gm18852-201ENSMUST00000184149 3593 ntBASIC6.41□□□□□ -1.38
Sox1P53783 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC6.4□□□□□ -1.38
Sox1P53783 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Sox1P53783 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Sox1P53783 Gm37661-201ENSMUST00000191863 1550 ntBASIC6.4□□□□□ -1.38
Sox1P53783 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
Sox1P53783 Gm43421-201ENSMUST00000200044 2905 ntBASIC6.4□□□□□ -1.38
Sox1P53783 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Sox1P53783 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Sox1P53783 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Sox1P53783 Gm37951-201ENSMUST00000192963 3032 ntBASIC6.4□□□□□ -1.38
Sox1P53783 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Sox1P53783 Gm37142-201ENSMUST00000193718 3110 ntBASIC6.4□□□□□ -1.38
Sox1P53783 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Sox1P53783 Gm42483-201ENSMUST00000197556 1742 ntBASIC6.4□□□□□ -1.38
Sox1P53783 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC6.4□□□□□ -1.38
Sox1P53783 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Sox1P53783 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms