Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm14520-201ENSMUST00000119258 387 ntBASIC4.68□□□□□ -1.66
Sox6P40645 Gm13488-201ENSMUST00000120419 179 ntBASIC4.68□□□□□ -1.66
Sox6P40645 Gm13537-201ENSMUST00000120467 267 ntBASIC4.68□□□□□ -1.66
Sox6P40645 Gm11805-201ENSMUST00000121238 600 ntBASIC4.68□□□□□ -1.66
Sox6P40645 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Sox6P40645 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC4.68□□□□□ -1.66
Sox6P40645 Gm23318-201ENSMUST00000158000 108 ntBASIC4.68□□□□□ -1.66
Sox6P40645 Gm25907-201ENSMUST00000158486 125 ntBASIC4.68□□□□□ -1.66
Sox6P40645 Gm4831-201ENSMUST00000174626 594 ntBASIC4.68□□□□□ -1.66
Sox6P40645 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC4.68□□□□□ -1.66
Sox6P40645 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC4.68□□□□□ -1.66
Sox6P40645 Gm29148-201ENSMUST00000188140 336 ntBASIC4.68□□□□□ -1.66
Sox6P40645 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Sox6P40645 Gm18348-201ENSMUST00000191227 820 ntBASIC4.68□□□□□ -1.66
Sox6P40645 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC4.68□□□□□ -1.66
Sox6P40645 Gm36998-201ENSMUST00000193205 704 ntBASIC4.68□□□□□ -1.66
Sox6P40645 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC4.68□□□□□ -1.66
Sox6P40645 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Sox6P40645 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC4.68□□□□□ -1.66
Sox6P40645 Gm9173-201ENSMUST00000198054 400 ntBASIC4.68□□□□□ -1.66
Sox6P40645 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Sox6P40645 AC112956.1-201ENSMUST00000213563 492 ntBASIC4.68□□□□□ -1.66
Sox6P40645 AC129323.1-201ENSMUST00000216733 470 ntBASIC4.68□□□□□ -1.66
Sox6P40645 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Sox6P40645 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Sox6P40645 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Sox6P40645 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Sox6P40645 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Sox6P40645 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Sox6P40645 AC122382.2-201ENSMUST00000225128 3602 ntBASIC4.68□□□□□ -1.66
Sox6P40645 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC4.68□□□□□ -1.66
Sox6P40645 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Sox6P40645 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
Sox6P40645 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Sox6P40645 Gm42910-201ENSMUST00000198917 2921 ntBASIC4.67□□□□□ -1.66
Sox6P40645 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Sox6P40645 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Sox6P40645 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Sox6P40645 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
Sox6P40645 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Sox6P40645 Gm26067-201ENSMUST00000103789 110 ntBASIC4.67□□□□□ -1.66
Sox6P40645 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
Sox6P40645 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC4.67□□□□□ -1.66
Sox6P40645 Gm13451-201ENSMUST00000117649 592 ntBASIC4.67□□□□□ -1.66
Sox6P40645 Gm14576-201ENSMUST00000118073 1111 ntBASIC4.67□□□□□ -1.66
Sox6P40645 Gm26925-201ENSMUST00000182470 957 ntBASIC4.67□□□□□ -1.66
Sox6P40645 Gm27849-201ENSMUST00000183673 125 ntBASIC4.67□□□□□ -1.66
Sox6P40645 Mir7037-201ENSMUST00000184414 65 ntBASIC4.67□□□□□ -1.66
Sox6P40645 Gm28975-201ENSMUST00000186412 686 ntBASIC4.67□□□□□ -1.66
Sox6P40645 Gm29668-201ENSMUST00000187802 315 ntBASIC4.67□□□□□ -1.66
Sox6P40645 Gm37421-201ENSMUST00000193088 132 ntBASIC4.67□□□□□ -1.66
Sox6P40645 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC4.67□□□□□ -1.66
Sox6P40645 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Sox6P40645 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Sox6P40645 Gm44221-201ENSMUST00000203552 388 ntBASIC4.67□□□□□ -1.66
Sox6P40645 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC4.67□□□□□ -1.66
Sox6P40645 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC4.67□□□□□ -1.66
Sox6P40645 AC110381.1-201ENSMUST00000218987 586 ntBASIC4.67□□□□□ -1.66
Sox6P40645 AC165092.2-201ENSMUST00000224681 368 ntBASIC4.67□□□□□ -1.66
Sox6P40645 AC154618.1-201ENSMUST00000227451 303 ntBASIC4.67□□□□□ -1.66
Sox6P40645 Clec2j-201ENSMUST00000032517 515 ntBASIC4.67□□□□□ -1.66
Sox6P40645 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Sox6P40645 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC4.67□□□□□ -1.66
Sox6P40645 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
Sox6P40645 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Sox6P40645 Gm44822-201ENSMUST00000208559 6389 ntBASIC4.67□□□□□ -1.66
Sox6P40645 Gm7416-201ENSMUST00000117448 1487 ntBASIC4.67□□□□□ -1.66
Sox6P40645 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Sox6P40645 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Sox6P40645 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
Sox6P40645 AC147639.2-202ENSMUST00000224834 1545 ntBASIC4.67□□□□□ -1.66
Sox6P40645 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
Sox6P40645 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Sox6P40645 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Sox6P40645 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Sox6P40645 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC4.66□□□□□ -1.66
Sox6P40645 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Sox6P40645 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
Sox6P40645 Gm37514-201ENSMUST00000194512 2753 ntBASIC4.66□□□□□ -1.66
Sox6P40645 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Sox6P40645 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Sox6P40645 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
Sox6P40645 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Sox6P40645 Gm13890-201ENSMUST00000117578 390 ntBASIC4.66□□□□□ -1.66
Sox6P40645 Gm12704-201ENSMUST00000119789 464 ntBASIC4.66□□□□□ -1.66
Sox6P40645 Gm12849-201ENSMUST00000120013 739 ntBASIC4.66□□□□□ -1.66
Sox6P40645 Gm14655-201ENSMUST00000120124 578 ntBASIC4.66□□□□□ -1.66
Sox6P40645 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Sox6P40645 Gm22958-201ENSMUST00000122512 184 ntBASIC4.66□□□□□ -1.66
Sox6P40645 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Sox6P40645 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC4.66□□□□□ -1.66
Sox6P40645 Gm24944-201ENSMUST00000158330 128 ntBASIC4.66□□□□□ -1.66
Sox6P40645 Gm10319-202ENSMUST00000159439 846 ntBASIC4.66□□□□□ -1.66
Sox6P40645 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Sox6P40645 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Sox6P40645 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Sox6P40645 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
Sox6P40645 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
Sox6P40645 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC4.66□□□□□ -1.66
Sox6P40645 Mir7235-201ENSMUST00000183796 56 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 101 ms