Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm28504-201ENSMUST00000190977 666 ntBASIC7.08□□□□□ -1.28
Col18a1P39061 Gm37837-201ENSMUST00000191743 604 ntBASIC7.08□□□□□ -1.28
Col18a1P39061 Gm31511-201ENSMUST00000193134 657 ntBASIC7.08□□□□□ -1.28
Col18a1P39061 Gm35843-201ENSMUST00000193716 666 ntBASIC7.08□□□□□ -1.28
Col18a1P39061 Gm18864-201ENSMUST00000194518 1051 ntBASIC7.08□□□□□ -1.28
Col18a1P39061 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC7.08□□□□□ -1.28
Col18a1P39061 Gm45651-201ENSMUST00000210857 335 ntBASIC7.08□□□□□ -1.28
Col18a1P39061 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC7.08□□□□□ -1.28
Col18a1P39061 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC7.08□□□□□ -1.28
Col18a1P39061 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Col18a1P39061 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Col18a1P39061 Mir20a-201ENSMUST00000083508 107 ntBASIC7.08□□□□□ -1.28
Col18a1P39061 Vmn1r43-201ENSMUST00000089418 1069 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Col18a1P39061 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col18a1P39061 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Col18a1P39061 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC7.07□□□□□ -1.28
Col18a1P39061 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Col18a1P39061 Gm19035-201ENSMUST00000193299 1742 ntBASIC7.07□□□□□ -1.28
Col18a1P39061 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC7.07□□□□□ -1.28
Col18a1P39061 Sipa1l1-208ENSMUST00000222298 6179 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col18a1P39061 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Col18a1P39061 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Col18a1P39061 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Col18a1P39061 AC159476.1-201ENSMUST00000215914 1668 ntBASIC7.07□□□□□ -1.28
Col18a1P39061 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
Col18a1P39061 Gm22758-201ENSMUST00000102275 96 ntBASIC7.07□□□□□ -1.28
Col18a1P39061 Gm23593-201ENSMUST00000104309 120 ntBASIC7.07□□□□□ -1.28
Col18a1P39061 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
Col18a1P39061 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC7.07□□□□□ -1.28
Col18a1P39061 Gm11790-201ENSMUST00000119569 455 ntBASIC7.07□□□□□ -1.28
Col18a1P39061 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC7.07□□□□□ -1.28
Col18a1P39061 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC7.07□□□□□ -1.28
Col18a1P39061 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Col18a1P39061 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Col18a1P39061 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC7.07□□□□□ -1.28
Col18a1P39061 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC7.07□□□□□ -1.28
Col18a1P39061 Gm27193-201ENSMUST00000184217 586 ntBASIC7.07□□□□□ -1.28
Col18a1P39061 Gm28615-201ENSMUST00000187527 482 ntBASIC7.07□□□□□ -1.28
Col18a1P39061 Gm37438-201ENSMUST00000192813 393 ntBASIC7.07□□□□□ -1.28
Col18a1P39061 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC7.07□□□□□ -1.28
Col18a1P39061 Gm19186-201ENSMUST00000219922 333 ntBASIC7.07□□□□□ -1.28
Col18a1P39061 AC130673.2-201ENSMUST00000228091 797 ntBASIC7.07□□□□□ -1.28
Col18a1P39061 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Col18a1P39061 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC7.07□□□□□ -1.28
Col18a1P39061 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Col18a1P39061 Gm45644-201ENSMUST00000210255 2740 ntBASIC7.07□□□□□ -1.28
Col18a1P39061 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col18a1P39061 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Col18a1P39061 Gm20768-201ENSMUST00000199527 2338 ntBASIC7.07□□□□□ -1.28
Col18a1P39061 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col18a1P39061 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Col18a1P39061 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Col18a1P39061 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC7.06□□□□□ -1.28
Col18a1P39061 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Col18a1P39061 Ubr5-204ENSMUST00000226414 8397 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Col18a1P39061 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Col18a1P39061 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC7.06□□□□□ -1.28
Col18a1P39061 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC7.06□□□□□ -1.28
Col18a1P39061 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC7.06□□□□□ -1.28
Col18a1P39061 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Col18a1P39061 Gm24190-201ENSMUST00000157976 216 ntBASIC7.06□□□□□ -1.28
Col18a1P39061 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC7.06□□□□□ -1.28
Col18a1P39061 Mir6416-201ENSMUST00000183664 117 ntBASIC7.06□□□□□ -1.28
Col18a1P39061 Gm3145-201ENSMUST00000188584 220 ntBASIC7.06□□□□□ -1.28
Col18a1P39061 Gm37581-201ENSMUST00000192371 988 ntBASIC7.06□□□□□ -1.28
Col18a1P39061 Mir1892-201ENSMUST00000197752 80 ntBASIC7.06□□□□□ -1.28
Col18a1P39061 Gm19104-201ENSMUST00000198392 679 ntBASIC7.06□□□□□ -1.28
Col18a1P39061 Gm19233-201ENSMUST00000219772 936 ntBASIC7.06□□□□□ -1.28
Col18a1P39061 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Col18a1P39061 AC161269.1-201ENSMUST00000228426 318 ntBASIC7.06□□□□□ -1.28
Col18a1P39061 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col18a1P39061 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Col18a1P39061 Nebl-201ENSMUST00000028080 5780 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col18a1P39061 Lsamp-202ENSMUST00000099761 8794 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col18a1P39061 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col18a1P39061 Gm6503-201ENSMUST00000210829 2225 ntBASIC7.06□□□□□ -1.28
Col18a1P39061 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Col18a1P39061 Dus4l-201ENSMUST00000020977 1773 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col18a1P39061 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col18a1P39061 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Col18a1P39061 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col18a1P39061 Osbpl3-204ENSMUST00000114468 6494 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col18a1P39061 Srcap-214ENSMUST00000190390 9633 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Col18a1P39061 Smyd3-204ENSMUST00000128302 6871 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col18a1P39061 AC160028.2-201ENSMUST00000218937 2519 ntBASIC7.05□□□□□ -1.28
Col18a1P39061 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Col18a1P39061 Gm14878-201ENSMUST00000118167 293 ntBASIC7.05□□□□□ -1.28
Col18a1P39061 Gm15854-201ENSMUST00000118879 808 ntBASIC7.05□□□□□ -1.28
Col18a1P39061 Gm22204-201ENSMUST00000122654 327 ntBASIC7.05□□□□□ -1.28
Col18a1P39061 Gm23069-201ENSMUST00000158240 311 ntBASIC7.05□□□□□ -1.28
Col18a1P39061 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col18a1P39061 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC7.05□□□□□ -1.28
Col18a1P39061 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC7.05□□□□□ -1.28
Col18a1P39061 Gm28740-201ENSMUST00000186142 215 ntBASIC7.05□□□□□ -1.28
Col18a1P39061 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Col18a1P39061 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Col18a1P39061 Gm37961-201ENSMUST00000192729 299 ntBASIC7.05□□□□□ -1.28
Col18a1P39061 Gm43350-201ENSMUST00000196382 711 ntBASIC7.05□□□□□ -1.28
Col18a1P39061 Gm43035-201ENSMUST00000197626 517 ntBASIC7.05□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms