Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Usp4P35123 Mir412-201ENSMUST00000083636 80 ntBASIC6.05□□□□□ -1.44
Usp4P35123 Gm17165-201ENSMUST00000096155 493 ntBASIC6.05□□□□□ -1.44
Usp4P35123 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Usp4P35123 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC6.05□□□□□ -1.44
Usp4P35123 AC130827.1-201ENSMUST00000220476 3850 ntBASIC6.05□□□□□ -1.44
Usp4P35123 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Usp4P35123 Gm37010-201ENSMUST00000194539 1704 ntBASIC6.05□□□□□ -1.44
Usp4P35123 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC6.05□□□□□ -1.44
Usp4P35123 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Usp4P35123 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Usp4P35123 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC6.05□□□□□ -1.44
Usp4P35123 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Usp4P35123 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Usp4P35123 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Usp4P35123 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Usp4P35123 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Usp4P35123 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC6.04□□□□□ -1.44
Usp4P35123 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Usp4P35123 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Usp4P35123 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Usp4P35123 Gm37551-201ENSMUST00000195556 2861 ntBASIC6.04□□□□□ -1.44
Usp4P35123 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Usp4P35123 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Usp4P35123 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Usp4P35123 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Usp4P35123 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC6.04□□□□□ -1.44
Usp4P35123 Gm12873-201ENSMUST00000119988 422 ntBASIC6.04□□□□□ -1.44
Usp4P35123 Gm15193-201ENSMUST00000120224 865 ntBASIC6.04□□□□□ -1.44
Usp4P35123 Gm14600-201ENSMUST00000121032 630 ntBASIC6.04□□□□□ -1.44
Usp4P35123 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC6.04□□□□□ -1.44
Usp4P35123 Gm15237-201ENSMUST00000122104 469 ntBASIC6.04□□□□□ -1.44
Usp4P35123 Gm23030-201ENSMUST00000158004 273 ntBASIC6.04□□□□□ -1.44
Usp4P35123 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
Usp4P35123 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC6.04□□□□□ -1.44
Usp4P35123 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC6.04□□□□□ -1.44
Usp4P35123 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC6.04□□□□□ -1.44
Usp4P35123 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Usp4P35123 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Usp4P35123 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC6.04□□□□□ -1.44
Usp4P35123 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC6.04□□□□□ -1.44
Usp4P35123 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC6.04□□□□□ -1.44
Usp4P35123 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC6.04□□□□□ -1.44
Usp4P35123 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC6.04□□□□□ -1.44
Usp4P35123 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC6.04□□□□□ -1.44
Usp4P35123 Gm27006-201ENSMUST00000182218 943 ntBASIC6.04□□□□□ -1.44
Usp4P35123 Gm27004-201ENSMUST00000183300 727 ntBASIC6.04□□□□□ -1.44
Usp4P35123 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Usp4P35123 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC6.04□□□□□ -1.44
Usp4P35123 Gm28080-201ENSMUST00000188552 722 ntBASIC6.04□□□□□ -1.44
Usp4P35123 Gm28066-201ENSMUST00000188657 472 ntBASIC6.04□□□□□ -1.44
Usp4P35123 Gm29600-201ENSMUST00000188687 377 ntBASIC6.04□□□□□ -1.44
Usp4P35123 Gm21524-201ENSMUST00000190499 696 ntBASIC6.04□□□□□ -1.44
Usp4P35123 Gm21715-201ENSMUST00000191056 694 ntBASIC6.04□□□□□ -1.44
Usp4P35123 Gm18426-201ENSMUST00000191874 973 ntBASIC6.04□□□□□ -1.44
Usp4P35123 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Usp4P35123 Ighv1-27-201ENSMUST00000194473 340 ntBASIC6.04□□□□□ -1.44
Usp4P35123 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC6.04□□□□□ -1.44
Usp4P35123 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC6.04□□□□□ -1.44
Usp4P35123 Gm43228-201ENSMUST00000200735 264 ntBASIC6.04□□□□□ -1.44
Usp4P35123 Gm43659-201ENSMUST00000200894 628 ntBASIC6.04□□□□□ -1.44
Usp4P35123 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Usp4P35123 Gm45034-201ENSMUST00000206831 482 ntBASIC6.04□□□□□ -1.44
Usp4P35123 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Usp4P35123 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC6.04□□□□□ -1.44
Usp4P35123 Gm36247-201ENSMUST00000211834 285 ntBASIC6.04□□□□□ -1.44
Usp4P35123 Gm45722-201ENSMUST00000213075 466 ntBASIC6.04□□□□□ -1.44
Usp4P35123 Gm34005-201ENSMUST00000215834 282 ntBASIC6.04□□□□□ -1.44
Usp4P35123 AC119894.1-201ENSMUST00000220399 350 ntBASIC6.04□□□□□ -1.44
Usp4P35123 AC160114.1-201ENSMUST00000221930 365 ntBASIC6.04□□□□□ -1.44
Usp4P35123 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC6.04□□□□□ -1.44
Usp4P35123 AC122459.2-201ENSMUST00000227099 638 ntBASIC6.04□□□□□ -1.44
Usp4P35123 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Usp4P35123 Gm25403-201ENSMUST00000082971 143 ntBASIC6.04□□□□□ -1.44
Usp4P35123 Mir298-201ENSMUST00000083476 82 ntBASIC6.04□□□□□ -1.44
Usp4P35123 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Usp4P35123 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Usp4P35123 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Usp4P35123 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC6.04□□□□□ -1.44
Usp4P35123 AC122357.1-201ENSMUST00000221652 1515 ntBASIC6.04□□□□□ -1.44
Usp4P35123 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
Usp4P35123 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
Usp4P35123 Gm6818-201ENSMUST00000190556 2558 ntBASIC6.04□□□□□ -1.44
Usp4P35123 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Usp4P35123 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Usp4P35123 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Usp4P35123 Gm42534-201ENSMUST00000196063 1754 ntBASIC6.03□□□□□ -1.44
Usp4P35123 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Usp4P35123 Gm44675-201ENSMUST00000208188 2927 ntBASIC6.03□□□□□ -1.44
Usp4P35123 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Usp4P35123 Gm12388-201ENSMUST00000119112 1887 ntBASIC6.03□□□□□ -1.44
Usp4P35123 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Usp4P35123 Gm44586-201ENSMUST00000207166 2737 ntBASIC6.03□□□□□ -1.44
Usp4P35123 Gm42600-201ENSMUST00000202081 3588 ntBASIC6.03□□□□□ -1.44
Usp4P35123 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Usp4P35123 Gm13428-201ENSMUST00000117540 365 ntBASIC6.03□□□□□ -1.44
Usp4P35123 Gm8430-201ENSMUST00000119780 471 ntBASIC6.03□□□□□ -1.44
Usp4P35123 Gm11848-201ENSMUST00000121207 973 ntBASIC6.03□□□□□ -1.44
Usp4P35123 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC6.03□□□□□ -1.44
Usp4P35123 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms