Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 AC139758.1-201ENSMUST00000226573 930 ntBASIC5.53□□□□□ -1.52
Col2a1P28481 Gm6065-201ENSMUST00000081336 492 ntBASIC5.53□□□□□ -1.52
Col2a1P28481 Gm6043-201ENSMUST00000099961 492 ntBASIC5.53□□□□□ -1.52
Col2a1P28481 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
Col2a1P28481 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col2a1P28481 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col2a1P28481 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col2a1P28481 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Col2a1P28481 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col2a1P28481 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col2a1P28481 Gm45415-201ENSMUST00000209644 2074 ntBASIC5.53□□□□□ -1.52
Col2a1P28481 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Col2a1P28481 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC5.53□□□□□ -1.52
Col2a1P28481 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC5.53□□□□□ -1.52
Col2a1P28481 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Col2a1P28481 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Col2a1P28481 Gm43462-201ENSMUST00000200265 3648 ntBASIC5.53□□□□□ -1.52
Col2a1P28481 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Col2a1P28481 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Col2a1P28481 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Col2a1P28481 Gm37749-201ENSMUST00000193917 1899 ntBASIC5.53□□□□□ -1.52
Col2a1P28481 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col2a1P28481 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Col2a1P28481 Gm11742-201ENSMUST00000119903 233 ntBASIC5.52□□□□□ -1.53
Col2a1P28481 Gm14563-201ENSMUST00000120571 354 ntBASIC5.52□□□□□ -1.53
Col2a1P28481 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Col2a1P28481 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Col2a1P28481 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC5.52□□□□□ -1.53
Col2a1P28481 Gm24251-201ENSMUST00000157324 114 ntBASIC5.52□□□□□ -1.53
Col2a1P28481 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col2a1P28481 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Col2a1P28481 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col2a1P28481 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Col2a1P28481 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC5.52□□□□□ -1.53
Col2a1P28481 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Col2a1P28481 AL589696.1-201ENSMUST00000225711 330 ntBASIC5.52□□□□□ -1.53
Col2a1P28481 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col2a1P28481 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col2a1P28481 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Col2a1P28481 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col2a1P28481 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC5.52□□□□□ -1.53
Col2a1P28481 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col2a1P28481 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Col2a1P28481 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col2a1P28481 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Col2a1P28481 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Col2a1P28481 AC159896.3-201ENSMUST00000215904 3835 ntBASIC5.52□□□□□ -1.53
Col2a1P28481 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC5.52□□□□□ -1.53
Col2a1P28481 Defa-ps15-201ENSMUST00000118178 477 ntBASIC5.51□□□□□ -1.53
Col2a1P28481 Gm15333-201ENSMUST00000118825 364 ntBASIC5.51□□□□□ -1.53
Col2a1P28481 Gm12041-201ENSMUST00000121606 602 ntBASIC5.51□□□□□ -1.53
Col2a1P28481 Gm25665-201ENSMUST00000157695 110 ntBASIC5.51□□□□□ -1.53
Col2a1P28481 Gm25923-201ENSMUST00000158312 138 ntBASIC5.51□□□□□ -1.53
Col2a1P28481 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col2a1P28481 Gm27568-201ENSMUST00000184220 99 ntBASIC5.51□□□□□ -1.53
Col2a1P28481 Gm27760-201ENSMUST00000185048 114 ntBASIC5.51□□□□□ -1.53
Col2a1P28481 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC5.51□□□□□ -1.53
Col2a1P28481 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC5.51□□□□□ -1.53
Col2a1P28481 Gm37836-201ENSMUST00000195875 175 ntBASIC5.51□□□□□ -1.53
Col2a1P28481 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC5.51□□□□□ -1.53
Col2a1P28481 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC5.51□□□□□ -1.53
Col2a1P28481 Gm2059-201ENSMUST00000212025 287 ntBASIC5.51□□□□□ -1.53
Col2a1P28481 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC5.51□□□□□ -1.53
Col2a1P28481 AC158511.1-201ENSMUST00000223622 764 ntBASIC5.51□□□□□ -1.53
Col2a1P28481 Gm25140-201ENSMUST00000083254 140 ntBASIC5.51□□□□□ -1.53
Col2a1P28481 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC5.51□□□□□ -1.53
Col2a1P28481 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Col2a1P28481 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col2a1P28481 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col2a1P28481 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Col2a1P28481 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC5.51□□□□□ -1.53
Col2a1P28481 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col2a1P28481 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Col2a1P28481 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col2a1P28481 Gm37226-201ENSMUST00000191644 3255 ntBASIC5.51□□□□□ -1.53
Col2a1P28481 Naip3-201ENSMUST00000118082 4208 ntBASIC5.51□□□□□ -1.53
Col2a1P28481 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Col2a1P28481 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col2a1P28481 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Col2a1P28481 Gm6645-201ENSMUST00000118505 2726 ntBASIC5.51□□□□□ -1.53
Col2a1P28481 Il5ra-203ENSMUST00000205004 2271 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col2a1P28481 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Col2a1P28481 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC5.51□□□□□ -1.53
Col2a1P28481 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col2a1P28481 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Col2a1P28481 Gm12186-201ENSMUST00000119050 945 ntBASIC5.51□□□□□ -1.53
Col2a1P28481 Gm15206-201ENSMUST00000119143 454 ntBASIC5.51□□□□□ -1.53
Col2a1P28481 Gm15745-201ENSMUST00000119807 115 ntBASIC5.51□□□□□ -1.53
Col2a1P28481 Gm13484-201ENSMUST00000120738 412 ntBASIC5.51□□□□□ -1.53
Col2a1P28481 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC5.51□□□□□ -1.53
Col2a1P28481 Gm22819-201ENSMUST00000157445 303 ntBASIC5.51□□□□□ -1.53
Col2a1P28481 Gm26085-201ENSMUST00000157900 116 ntBASIC5.51□□□□□ -1.53
Col2a1P28481 Gm16114-201ENSMUST00000161930 300 ntBASIC5.51□□□□□ -1.53
Col2a1P28481 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col2a1P28481 Gm17152-201ENSMUST00000172430 535 ntBASIC5.51□□□□□ -1.53
Col2a1P28481 Gm27883-201ENSMUST00000183941 102 ntBASIC5.51□□□□□ -1.53
Col2a1P28481 Gm37670-201ENSMUST00000193622 229 ntBASIC5.51□□□□□ -1.53
Col2a1P28481 Gm37167-201ENSMUST00000194946 396 ntBASIC5.51□□□□□ -1.53
Col2a1P28481 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col2a1P28481 Gm45007-201ENSMUST00000206237 366 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms