Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Sdc1P18828 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Sdc1P18828 Gm37407-201ENSMUST00000194793 1316 ntBASIC4.01□□□□□ -1.77
Sdc1P18828 Gm43130-201ENSMUST00000197721 3907 ntBASIC4.01□□□□□ -1.77
Sdc1P18828 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Sdc1P18828 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Sdc1P18828 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Sdc1P18828 Gm20486-201ENSMUST00000101544 128 ntBASIC4.01□□□□□ -1.77
Sdc1P18828 Gm24265-201ENSMUST00000101833 141 ntBASIC4.01□□□□□ -1.77
Sdc1P18828 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Sdc1P18828 Gm11975-201ENSMUST00000118772 481 ntBASIC4.01□□□□□ -1.77
Sdc1P18828 Gm12375-201ENSMUST00000119331 921 ntBASIC4.01□□□□□ -1.77
Sdc1P18828 Gm8545-201ENSMUST00000120692 801 ntBASIC4.01□□□□□ -1.77
Sdc1P18828 Gm15044-201ENSMUST00000120703 598 ntBASIC4.01□□□□□ -1.77
Sdc1P18828 Gm22959-201ENSMUST00000122514 303 ntBASIC4.01□□□□□ -1.77
Sdc1P18828 Gm25806-201ENSMUST00000122782 122 ntBASIC4.01□□□□□ -1.77
Sdc1P18828 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC4.01□□□□□ -1.77
Sdc1P18828 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Sdc1P18828 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC4.01□□□□□ -1.77
Sdc1P18828 Gm16318-201ENSMUST00000162402 601 ntBASIC4.01□□□□□ -1.77
Sdc1P18828 Gm22122-201ENSMUST00000175147 200 ntBASIC4.01□□□□□ -1.77
Sdc1P18828 Gm24407-201ENSMUST00000177864 141 ntBASIC4.01□□□□□ -1.77
Sdc1P18828 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC4.01□□□□□ -1.77
Sdc1P18828 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Sdc1P18828 Gm9457-201ENSMUST00000180176 372 ntBASIC4.01□□□□□ -1.77
Sdc1P18828 Gm26983-201ENSMUST00000182051 388 ntBASIC4.01□□□□□ -1.77
Sdc1P18828 Gm21542-201ENSMUST00000182307 993 ntBASIC4.01□□□□□ -1.77
Sdc1P18828 Gm27976-201ENSMUST00000183635 162 ntBASIC4.01□□□□□ -1.77
Sdc1P18828 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC4.01□□□□□ -1.77
Sdc1P18828 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC4.01□□□□□ -1.77
Sdc1P18828 Gm10048-201ENSMUST00000194196 372 ntBASIC4.01□□□□□ -1.77
Sdc1P18828 Gm18864-201ENSMUST00000194518 1051 ntBASIC4.01□□□□□ -1.77
Sdc1P18828 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC4.01□□□□□ -1.77
Sdc1P18828 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC4.01□□□□□ -1.77
Sdc1P18828 AC151967.1-201ENSMUST00000198146 76 ntBASIC4.01□□□□□ -1.77
Sdc1P18828 1110060G06Rik-201ENSMUST00000200372 499 ntBASIC4.01□□□□□ -1.77
Sdc1P18828 Gm45689-201ENSMUST00000210522 133 ntBASIC4.01□□□□□ -1.77
Sdc1P18828 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Sdc1P18828 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC4.01□□□□□ -1.77
Sdc1P18828 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC4.01□□□□□ -1.77
Sdc1P18828 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC4.01□□□□□ -1.77
Sdc1P18828 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Sdc1P18828 Olfr790-204ENSMUST00000218901 1070 ntBASIC4.01□□□□□ -1.77
Sdc1P18828 AC156037.1-201ENSMUST00000221133 127 ntBASIC4.01□□□□□ -1.77
Sdc1P18828 AC125190.2-201ENSMUST00000221160 497 ntBASIC4.01□□□□□ -1.77
Sdc1P18828 AC174776.1-201ENSMUST00000221509 405 ntBASIC4.01□□□□□ -1.77
Sdc1P18828 AC125543.3-201ENSMUST00000221991 126 ntBASIC4.01□□□□□ -1.77
Sdc1P18828 AC174776.2-201ENSMUST00000222561 405 ntBASIC4.01□□□□□ -1.77
Sdc1P18828 CT009713.4-201ENSMUST00000224246 272 ntBASIC4.01□□□□□ -1.77
Sdc1P18828 AC130536.1-201ENSMUST00000224425 271 ntBASIC4.01□□□□□ -1.77
Sdc1P18828 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Sdc1P18828 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Sdc1P18828 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Sdc1P18828 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Sdc1P18828 Gm25515-201ENSMUST00000083858 157 ntBASIC4.01□□□□□ -1.77
Sdc1P18828 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Sdc1P18828 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Sdc1P18828 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Sdc1P18828 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Sdc1P18828 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Sdc1P18828 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Sdc1P18828 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Sdc1P18828 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4□□□□□ -1.77
Sdc1P18828 Gm4954-201ENSMUST00000135069 1601 ntBASIC4□□□□□ -1.77
Sdc1P18828 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC4□□□□□ -1.77
Sdc1P18828 Gm17752-201ENSMUST00000185787 3726 ntBASIC4□□□□□ -1.77
Sdc1P18828 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Sdc1P18828 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Sdc1P18828 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Sdc1P18828 Gm23440-201ENSMUST00000104299 130 ntBASIC4□□□□□ -1.77
Sdc1P18828 Gm14863-201ENSMUST00000119648 307 ntBASIC4□□□□□ -1.77
Sdc1P18828 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC4□□□□□ -1.77
Sdc1P18828 Gm15225-201ENSMUST00000120449 1017 ntBASIC4□□□□□ -1.77
Sdc1P18828 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC4□□□□□ -1.77
Sdc1P18828 Gm12267-201ENSMUST00000121609 761 ntBASIC4□□□□□ -1.77
Sdc1P18828 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC4□□□□□ -1.77
Sdc1P18828 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC4□□□□□ -1.77
Sdc1P18828 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC4□□□□□ -1.77
Sdc1P18828 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC4□□□□□ -1.77
Sdc1P18828 Gm25430-201ENSMUST00000157614 289 ntBASIC4□□□□□ -1.77
Sdc1P18828 Gm15795-201ENSMUST00000160969 553 ntBASIC4□□□□□ -1.77
Sdc1P18828 Gm6808-201ENSMUST00000162341 807 ntBASIC4□□□□□ -1.77
Sdc1P18828 Cfhr3-201ENSMUST00000170441 1022 ntBASIC4□□□□□ -1.77
Sdc1P18828 Gm3715-201ENSMUST00000172308 617 ntBASIC4□□□□□ -1.77
Sdc1P18828 Gm20530-201ENSMUST00000174261 254 ntBASIC4□□□□□ -1.77
Sdc1P18828 Gm21614-201ENSMUST00000183260 1005 ntBASIC4□□□□□ -1.77
Sdc1P18828 Gm9569-201ENSMUST00000187492 787 ntBASIC4□□□□□ -1.77
Sdc1P18828 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC4□□□□□ -1.77
Sdc1P18828 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC4□□□□□ -1.77
Sdc1P18828 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC4□□□□□ -1.77
Sdc1P18828 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC4□□□□□ -1.77
Sdc1P18828 Gm18306-201ENSMUST00000207338 569 ntBASIC4□□□□□ -1.77
Sdc1P18828 Gm45200-201ENSMUST00000207434 919 ntBASIC4□□□□□ -1.77
Sdc1P18828 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC4□□□□□ -1.77
Sdc1P18828 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC4□□□□□ -1.77
Sdc1P18828 Gm45574-201ENSMUST00000210921 331 ntBASIC4□□□□□ -1.77
Sdc1P18828 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC4□□□□□ -1.77
Sdc1P18828 Gm8106-201ENSMUST00000213123 523 ntBASIC4□□□□□ -1.77
Sdc1P18828 Gm7439-201ENSMUST00000214053 835 ntBASIC4□□□□□ -1.77
Sdc1P18828 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC4□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms