Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Hmgb3O54879 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Hmgb3O54879 Gm43605-201ENSMUST00000199663 3426 ntBASIC3.92□□□□□ -1.78
Hmgb3O54879 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Hmgb3O54879 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Hmgb3O54879 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Hmgb3O54879 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC3.91□□□□□ -1.78
Hmgb3O54879 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC3.91□□□□□ -1.78
Hmgb3O54879 Gm45378-201ENSMUST00000211063 2711 ntBASIC3.91□□□□□ -1.78
Hmgb3O54879 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
Hmgb3O54879 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Hmgb3O54879 Gm23193-201ENSMUST00000102427 82 ntBASIC3.91□□□□□ -1.78
Hmgb3O54879 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Hmgb3O54879 Gm24170-201ENSMUST00000104124 133 ntBASIC3.91□□□□□ -1.78
Hmgb3O54879 Gm24789-201ENSMUST00000104282 131 ntBASIC3.91□□□□□ -1.78
Hmgb3O54879 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC3.91□□□□□ -1.78
Hmgb3O54879 Gm13452-201ENSMUST00000120896 1097 ntBASIC3.91□□□□□ -1.78
Hmgb3O54879 Gm13132-201ENSMUST00000121194 472 ntBASIC3.91□□□□□ -1.78
Hmgb3O54879 Llph-ps2-201ENSMUST00000122000 393 ntBASIC3.91□□□□□ -1.78
Hmgb3O54879 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC3.91□□□□□ -1.78
Hmgb3O54879 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC3.91□□□□□ -1.78
Hmgb3O54879 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC3.91□□□□□ -1.78
Hmgb3O54879 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC3.91□□□□□ -1.78
Hmgb3O54879 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC3.91□□□□□ -1.78
Hmgb3O54879 Gm24065-201ENSMUST00000157487 264 ntBASIC3.91□□□□□ -1.78
Hmgb3O54879 Gm24931-201ENSMUST00000158324 107 ntBASIC3.91□□□□□ -1.78
Hmgb3O54879 Ear-ps5-201ENSMUST00000164700 463 ntBASIC3.91□□□□□ -1.78
Hmgb3O54879 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Hmgb3O54879 Gm4831-201ENSMUST00000174626 594 ntBASIC3.91□□□□□ -1.78
Hmgb3O54879 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Hmgb3O54879 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Hmgb3O54879 Mir6539-201ENSMUST00000183732 110 ntBASIC3.91□□□□□ -1.78
Hmgb3O54879 Mir6417-201ENSMUST00000183815 116 ntBASIC3.91□□□□□ -1.78
Hmgb3O54879 Gm28118-201ENSMUST00000185957 294 ntBASIC3.91□□□□□ -1.78
Hmgb3O54879 Gm19206-201ENSMUST00000186401 827 ntBASIC3.91□□□□□ -1.78
Hmgb3O54879 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Hmgb3O54879 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC3.91□□□□□ -1.78
Hmgb3O54879 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC3.91□□□□□ -1.78
Hmgb3O54879 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Hmgb3O54879 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC3.91□□□□□ -1.78
Hmgb3O54879 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC3.91□□□□□ -1.78
Hmgb3O54879 Gm9134-201ENSMUST00000193186 551 ntBASIC3.91□□□□□ -1.78
Hmgb3O54879 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC3.91□□□□□ -1.78
Hmgb3O54879 Ighv1-35-201ENSMUST00000195265 351 ntBASIC3.91□□□□□ -1.78
Hmgb3O54879 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC3.91□□□□□ -1.78
Hmgb3O54879 Olfr856-ps1-201ENSMUST00000212177 948 ntBASIC3.91□□□□□ -1.78
Hmgb3O54879 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC3.91□□□□□ -1.78
Hmgb3O54879 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC3.91□□□□□ -1.78
Hmgb3O54879 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC3.91□□□□□ -1.78
Hmgb3O54879 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC3.91□□□□□ -1.78
Hmgb3O54879 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC3.91□□□□□ -1.78
Hmgb3O54879 AC155805.1-201ENSMUST00000222419 3808 ntBASIC3.91□□□□□ -1.78
Hmgb3O54879 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC3.91□□□□□ -1.78
Hmgb3O54879 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC3.91□□□□□ -1.78
Hmgb3O54879 AC129085.4-201ENSMUST00000224536 570 ntBASIC3.91□□□□□ -1.78
Hmgb3O54879 AC122034.1-201ENSMUST00000227641 595 ntBASIC3.91□□□□□ -1.78
Hmgb3O54879 AC138765.1-201ENSMUST00000228657 385 ntBASIC3.91□□□□□ -1.78
Hmgb3O54879 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Hmgb3O54879 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Hmgb3O54879 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Hmgb3O54879 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Hmgb3O54879 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Hmgb3O54879 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Hmgb3O54879 Mir298-201ENSMUST00000083476 82 ntBASIC3.91□□□□□ -1.78
Hmgb3O54879 Mir449a-201ENSMUST00000083641 91 ntBASIC3.91□□□□□ -1.78
Hmgb3O54879 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Hmgb3O54879 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Hmgb3O54879 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Hmgb3O54879 Gm42440-201ENSMUST00000197906 2284 ntBASIC3.91□□□□□ -1.78
Hmgb3O54879 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Hmgb3O54879 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Hmgb3O54879 Gm2987-201ENSMUST00000187673 1693 ntBASIC3.9□□□□□ -1.78
Hmgb3O54879 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
Hmgb3O54879 AC162938.2-205ENSMUST00000217551 2828 ntBASIC3.9□□□□□ -1.78
Hmgb3O54879 Gm19210-201ENSMUST00000199562 1350 ntBASIC3.9□□□□□ -1.78
Hmgb3O54879 Gm37412-201ENSMUST00000194866 4321 ntBASIC3.9□□□□□ -1.78
Hmgb3O54879 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Hmgb3O54879 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Hmgb3O54879 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Hmgb3O54879 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC3.9□□□□□ -1.78
Hmgb3O54879 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Hmgb3O54879 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Hmgb3O54879 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Hmgb3O54879 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
Hmgb3O54879 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm14938-201ENSMUST00000119482 943 ntBASIC3.9□□□□□ -1.79
Hmgb3O54879 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm22514-201ENSMUST00000122547 308 ntBASIC3.9□□□□□ -1.79
Hmgb3O54879 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm23993-201ENSMUST00000157478 144 ntBASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm25459-201ENSMUST00000157953 114 ntBASIC3.9□□□□□ -1.79
Hmgb3O54879 Esd-ps-201ENSMUST00000170684 847 ntBASIC3.9□□□□□ -1.79
Hmgb3O54879 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm27541-201ENSMUST00000184078 122 ntBASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms