Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Scn3aA2ASI5 Gm4842-201ENSMUST00000183237 835 ntBASIC5.38□□□□□ -1.55
Scn3aA2ASI5 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Scn3aA2ASI5 Gm17956-201ENSMUST00000199931 838 ntBASIC5.38□□□□□ -1.55
Scn3aA2ASI5 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Scn3aA2ASI5 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Scn3aA2ASI5 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Scn3aA2ASI5 Gm11251-201ENSMUST00000119593 2800 ntBASIC5.38□□□□□ -1.55
Scn3aA2ASI5 Gm16523-202ENSMUST00000203640 4750 ntBASIC5.38□□□□□ -1.55
Scn3aA2ASI5 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Scn3aA2ASI5 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Scn3aA2ASI5 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
Scn3aA2ASI5 Gm10936-201ENSMUST00000105264 252 ntBASIC5.38□□□□□ -1.55
Scn3aA2ASI5 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC5.38□□□□□ -1.55
Scn3aA2ASI5 Gm15786-201ENSMUST00000121079 450 ntBASIC5.38□□□□□ -1.55
Scn3aA2ASI5 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Scn3aA2ASI5 Magea9-ps-201ENSMUST00000140655 732 ntBASIC5.38□□□□□ -1.55
Scn3aA2ASI5 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Scn3aA2ASI5 Magea9-ps-202ENSMUST00000167328 899 ntBASIC5.38□□□□□ -1.55
Scn3aA2ASI5 Gm22177-201ENSMUST00000175002 158 ntBASIC5.38□□□□□ -1.55
Scn3aA2ASI5 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC5.38□□□□□ -1.55
Scn3aA2ASI5 Gm37908-201ENSMUST00000195828 470 ntBASIC5.38□□□□□ -1.55
Scn3aA2ASI5 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC5.38□□□□□ -1.55
Scn3aA2ASI5 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Scn3aA2ASI5 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Scn3aA2ASI5 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Scn3aA2ASI5 Gm5746-201ENSMUST00000183550 2200 ntBASIC5.38□□□□□ -1.55
Scn3aA2ASI5 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Scn3aA2ASI5 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Scn3aA2ASI5 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
Scn3aA2ASI5 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Scn3aA2ASI5 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Scn3aA2ASI5 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC5.37□□□□□ -1.55
Scn3aA2ASI5 Gm43490-201ENSMUST00000197593 2652 ntBASIC5.37□□□□□ -1.55
Scn3aA2ASI5 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Scn3aA2ASI5 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC5.37□□□□□ -1.55
Scn3aA2ASI5 Gm12704-201ENSMUST00000119789 464 ntBASIC5.37□□□□□ -1.55
Scn3aA2ASI5 Gm3145-201ENSMUST00000188584 220 ntBASIC5.37□□□□□ -1.55
Scn3aA2ASI5 Gm28116-201ENSMUST00000189064 387 ntBASIC5.37□□□□□ -1.55
Scn3aA2ASI5 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Scn3aA2ASI5 Igkv12-40-201ENSMUST00000199208 347 ntBASIC5.37□□□□□ -1.55
Scn3aA2ASI5 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Scn3aA2ASI5 Gm6177-201ENSMUST00000085589 465 ntBASIC5.37□□□□□ -1.55
Scn3aA2ASI5 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
Scn3aA2ASI5 Gm37833-201ENSMUST00000194342 3256 ntBASIC5.37□□□□□ -1.55
Scn3aA2ASI5 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Scn3aA2ASI5 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Scn3aA2ASI5 Gm37212-201ENSMUST00000192582 3650 ntBASIC5.37□□□□□ -1.55
Scn3aA2ASI5 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Scn3aA2ASI5 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Scn3aA2ASI5 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Scn3aA2ASI5 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Scn3aA2ASI5 Gm42704-201ENSMUST00000196875 1778 ntBASIC5.37□□□□□ -1.55
Scn3aA2ASI5 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Scn3aA2ASI5 Gm44434-201ENSMUST00000203918 3745 ntBASIC5.37□□□□□ -1.55
Scn3aA2ASI5 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Scn3aA2ASI5 AC122382.2-201ENSMUST00000225128 3602 ntBASIC5.37□□□□□ -1.55
Scn3aA2ASI5 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Scn3aA2ASI5 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC5.36□□□□□ -1.55
Scn3aA2ASI5 Gm14500-201ENSMUST00000121647 113 ntBASIC5.36□□□□□ -1.55
Scn3aA2ASI5 Gm20428-201ENSMUST00000174365 283 ntBASIC5.36□□□□□ -1.55
Scn3aA2ASI5 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC5.36□□□□□ -1.55
Scn3aA2ASI5 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Scn3aA2ASI5 AL589742.1-201ENSMUST00000226034 349 ntBASIC5.36□□□□□ -1.55
Scn3aA2ASI5 Mecom-201ENSMUST00000061088 348 ntBASIC5.36□□□□□ -1.55
Scn3aA2ASI5 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC5.36□□□□□ -1.55
Scn3aA2ASI5 n-R5s27-201ENSMUST00000093699 119 ntBASIC5.36□□□□□ -1.55
Scn3aA2ASI5 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Scn3aA2ASI5 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Scn3aA2ASI5 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Scn3aA2ASI5 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Scn3aA2ASI5 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Scn3aA2ASI5 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.36□□□□□ -1.55
Scn3aA2ASI5 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Scn3aA2ASI5 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Scn3aA2ASI5 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Scn3aA2ASI5 Gm43085-201ENSMUST00000202859 3132 ntBASIC5.36□□□□□ -1.55
Scn3aA2ASI5 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC5.36□□□□□ -1.55
Scn3aA2ASI5 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Scn3aA2ASI5 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Scn3aA2ASI5 Gm15752-201ENSMUST00000117427 394 ntBASIC5.36□□□□□ -1.55
Scn3aA2ASI5 Gm14628-201ENSMUST00000117508 635 ntBASIC5.36□□□□□ -1.55
Scn3aA2ASI5 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC5.36□□□□□ -1.55
Scn3aA2ASI5 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Scn3aA2ASI5 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC5.36□□□□□ -1.55
Scn3aA2ASI5 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
Scn3aA2ASI5 Gm37123-201ENSMUST00000192994 1171 ntBASIC5.36□□□□□ -1.55
Scn3aA2ASI5 AC123061.2-201ENSMUST00000226234 802 ntBASIC5.36□□□□□ -1.55
Scn3aA2ASI5 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC5.36□□□□□ -1.55
Scn3aA2ASI5 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Scn3aA2ASI5 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC5.36□□□□□ -1.55
Scn3aA2ASI5 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC5.36□□□□□ -1.55
Scn3aA2ASI5 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Scn3aA2ASI5 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Scn3aA2ASI5 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Scn3aA2ASI5 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Scn3aA2ASI5 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Scn3aA2ASI5 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Scn3aA2ASI5 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Scn3aA2ASI5 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms