Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC5.01□□□□□ -1.61
Scn1aA2APX8 Mir1957b-201ENSMUST00000184608 123 ntBASIC5.01□□□□□ -1.61
Scn1aA2APX8 Gm28503-201ENSMUST00000185966 147 ntBASIC5.01□□□□□ -1.61
Scn1aA2APX8 Gm5284-201ENSMUST00000199053 903 ntBASIC5.01□□□□□ -1.61
Scn1aA2APX8 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Scn1aA2APX8 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Scn1aA2APX8 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Scn1aA2APX8 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Scn1aA2APX8 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Scn1aA2APX8 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
Scn1aA2APX8 Gm38263-201ENSMUST00000195879 3059 ntBASIC5.01□□□□□ -1.61
Scn1aA2APX8 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC5.01□□□□□ -1.61
Scn1aA2APX8 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Scn1aA2APX8 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC5.01□□□□□ -1.61
Scn1aA2APX8 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Scn1aA2APX8 Gm15333-201ENSMUST00000118825 364 ntBASIC5.01□□□□□ -1.61
Scn1aA2APX8 Gm12189-201ENSMUST00000119779 912 ntBASIC5.01□□□□□ -1.61
Scn1aA2APX8 Gm24251-201ENSMUST00000157324 114 ntBASIC5.01□□□□□ -1.61
Scn1aA2APX8 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Scn1aA2APX8 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC5.01□□□□□ -1.61
Scn1aA2APX8 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
Scn1aA2APX8 Gm18828-202ENSMUST00000181035 310 ntBASIC5.01□□□□□ -1.61
Scn1aA2APX8 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Scn1aA2APX8 Gm19124-201ENSMUST00000191041 832 ntBASIC5.01□□□□□ -1.61
Scn1aA2APX8 Gm37558-201ENSMUST00000193684 2983 ntBASIC5.01□□□□□ -1.61
Scn1aA2APX8 Gm6366-201ENSMUST00000198766 826 ntBASIC5.01□□□□□ -1.61
Scn1aA2APX8 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC5.01□□□□□ -1.61
Scn1aA2APX8 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC5.01□□□□□ -1.61
Scn1aA2APX8 AC154627.3-201ENSMUST00000228441 334 ntBASIC5.01□□□□□ -1.61
Scn1aA2APX8 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Scn1aA2APX8 n-R5s3-201ENSMUST00000083879 112 ntBASIC5.01□□□□□ -1.61
Scn1aA2APX8 Gm26814-201ENSMUST00000181178 4149 ntBASIC5.01□□□□□ -1.61
Scn1aA2APX8 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Scn1aA2APX8 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Scn1aA2APX8 Gm43211-201ENSMUST00000196901 1899 ntBASIC5.01□□□□□ -1.61
Scn1aA2APX8 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Scn1aA2APX8 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Scn1aA2APX8 Gm37217-201ENSMUST00000194017 3521 ntBASIC5□□□□□ -1.61
Scn1aA2APX8 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Scn1aA2APX8 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC5□□□□□ -1.61
Scn1aA2APX8 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Scn1aA2APX8 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Scn1aA2APX8 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Scn1aA2APX8 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC5□□□□□ -1.61
Scn1aA2APX8 Gm24117-201ENSMUST00000103973 133 ntBASIC5□□□□□ -1.61
Scn1aA2APX8 Gm15206-201ENSMUST00000119143 454 ntBASIC5□□□□□ -1.61
Scn1aA2APX8 Gm4134-201ENSMUST00000173244 563 ntBASIC5□□□□□ -1.61
Scn1aA2APX8 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC5□□□□□ -1.61
Scn1aA2APX8 Gm36991-201ENSMUST00000191800 648 ntBASIC5□□□□□ -1.61
Scn1aA2APX8 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC5□□□□□ -1.61
Scn1aA2APX8 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC5□□□□□ -1.61
Scn1aA2APX8 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
Scn1aA2APX8 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC5□□□□□ -1.61
Scn1aA2APX8 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC5□□□□□ -1.61
Scn1aA2APX8 Olfr881-201ENSMUST00000074611 948 ntBASIC5□□□□□ -1.61
Scn1aA2APX8 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Scn1aA2APX8 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC5□□□□□ -1.61
Scn1aA2APX8 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Scn1aA2APX8 AC123705.3-201ENSMUST00000223531 2069 ntBASIC5□□□□□ -1.61
Scn1aA2APX8 Gm43888-201ENSMUST00000204405 2587 ntBASIC5□□□□□ -1.61
Scn1aA2APX8 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
Scn1aA2APX8 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC5□□□□□ -1.61
Scn1aA2APX8 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Scn1aA2APX8 Gm37060-201ENSMUST00000194997 2397 ntBASIC5□□□□□ -1.61
Scn1aA2APX8 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Scn1aA2APX8 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC5□□□□□ -1.61
Scn1aA2APX8 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
Scn1aA2APX8 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC5□□□□□ -1.61
Scn1aA2APX8 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Scn1aA2APX8 CT009734.1-201ENSMUST00000227657 1687 ntBASIC4.99□□□□□ -1.61
Scn1aA2APX8 AC122382.2-201ENSMUST00000225128 3602 ntBASIC4.99□□□□□ -1.61
Scn1aA2APX8 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Scn1aA2APX8 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC4.99□□□□□ -1.61
Scn1aA2APX8 Gm11914-201ENSMUST00000117094 507 ntBASIC4.99□□□□□ -1.61
Scn1aA2APX8 Gm12988-201ENSMUST00000119054 478 ntBASIC4.99□□□□□ -1.61
Scn1aA2APX8 Gm13333-201ENSMUST00000119424 781 ntBASIC4.99□□□□□ -1.61
Scn1aA2APX8 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC4.99□□□□□ -1.61
Scn1aA2APX8 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC4.99□□□□□ -1.61
Scn1aA2APX8 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC4.99□□□□□ -1.61
Scn1aA2APX8 Gm26085-201ENSMUST00000157900 116 ntBASIC4.99□□□□□ -1.61
Scn1aA2APX8 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Scn1aA2APX8 Gm8919-201ENSMUST00000182028 1014 ntBASIC4.99□□□□□ -1.61
Scn1aA2APX8 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
Scn1aA2APX8 Gm18382-201ENSMUST00000194394 582 ntBASIC4.99□□□□□ -1.61
Scn1aA2APX8 Gm44485-201ENSMUST00000199569 137 ntBASIC4.99□□□□□ -1.61
Scn1aA2APX8 Gm17956-201ENSMUST00000199931 838 ntBASIC4.99□□□□□ -1.61
Scn1aA2APX8 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC4.99□□□□□ -1.61
Scn1aA2APX8 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Scn1aA2APX8 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Scn1aA2APX8 Gm43085-201ENSMUST00000202859 3132 ntBASIC4.99□□□□□ -1.61
Scn1aA2APX8 Gm43282-201ENSMUST00000201848 2157 ntBASIC4.99□□□□□ -1.61
Scn1aA2APX8 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC4.99□□□□□ -1.61
Scn1aA2APX8 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC4.99□□□□□ -1.61
Scn1aA2APX8 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC4.99□□□□□ -1.61
Scn1aA2APX8 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Scn1aA2APX8 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Scn1aA2APX8 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Scn1aA2APX8 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC4.99□□□□□ -1.61
Scn1aA2APX8 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Scn1aA2APX8 Gm23014-201ENSMUST00000104144 130 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms