Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC4.89□□□□□ -1.63
H2afb2S4R1M3 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
H2afb2S4R1M3 Mir188-201ENSMUST00000083464 68 ntBASIC4.89□□□□□ -1.63
H2afb2S4R1M3 n-R5s3-201ENSMUST00000083879 112 ntBASIC4.89□□□□□ -1.63
H2afb2S4R1M3 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
H2afb2S4R1M3 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC4.89□□□□□ -1.63
H2afb2S4R1M3 Gm38020-201ENSMUST00000193066 4676 ntBASIC4.89□□□□□ -1.63
H2afb2S4R1M3 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
H2afb2S4R1M3 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
H2afb2S4R1M3 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
H2afb2S4R1M3 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
H2afb2S4R1M3 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
H2afb2S4R1M3 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
H2afb2S4R1M3 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC4.88□□□□□ -1.63
H2afb2S4R1M3 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
H2afb2S4R1M3 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
H2afb2S4R1M3 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC4.88□□□□□ -1.63
H2afb2S4R1M3 Gm16205-201ENSMUST00000117720 1027 ntBASIC4.88□□□□□ -1.63
H2afb2S4R1M3 Gm14082-201ENSMUST00000118582 801 ntBASIC4.88□□□□□ -1.63
H2afb2S4R1M3 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC4.88□□□□□ -1.63
H2afb2S4R1M3 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC4.88□□□□□ -1.63
H2afb2S4R1M3 Gm23537-201ENSMUST00000157536 330 ntBASIC4.88□□□□□ -1.63
H2afb2S4R1M3 Mir3110-201ENSMUST00000175053 80 ntBASIC4.88□□□□□ -1.63
H2afb2S4R1M3 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
H2afb2S4R1M3 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC4.88□□□□□ -1.63
H2afb2S4R1M3 Gm37073-201ENSMUST00000192469 1222 ntBASIC4.88□□□□□ -1.63
H2afb2S4R1M3 Gm18036-201ENSMUST00000195256 272 ntBASIC4.88□□□□□ -1.63
H2afb2S4R1M3 Gm37676-201ENSMUST00000195496 507 ntBASIC4.88□□□□□ -1.63
H2afb2S4R1M3 Gm44456-201ENSMUST00000196554 89 ntBASIC4.88□□□□□ -1.63
H2afb2S4R1M3 Gm43036-201ENSMUST00000200594 373 ntBASIC4.88□□□□□ -1.63
H2afb2S4R1M3 Gm43418-201ENSMUST00000201334 428 ntBASIC4.88□□□□□ -1.63
H2afb2S4R1M3 Gm43124-201ENSMUST00000201878 278 ntBASIC4.88□□□□□ -1.63
H2afb2S4R1M3 Gm18007-201ENSMUST00000205019 844 ntBASIC4.88□□□□□ -1.63
H2afb2S4R1M3 Gm10610-203ENSMUST00000208877 1206 ntTSL 5 BASIC4.88□□□□□ -1.63
H2afb2S4R1M3 AC158142.3-201ENSMUST00000226230 675 ntBASIC4.88□□□□□ -1.63
H2afb2S4R1M3 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
H2afb2S4R1M3 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
H2afb2S4R1M3 n-R5s205-201ENSMUST00000083149 125 ntBASIC4.88□□□□□ -1.63
H2afb2S4R1M3 Mir338-201ENSMUST00000083666 98 ntBASIC4.88□□□□□ -1.63
H2afb2S4R1M3 AC153959.1-201ENSMUST00000213617 1694 ntBASIC4.88□□□□□ -1.63
H2afb2S4R1M3 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
H2afb2S4R1M3 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
H2afb2S4R1M3 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
H2afb2S4R1M3 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC4.88□□□□□ -1.63
H2afb2S4R1M3 Gm44171-201ENSMUST00000203701 2109 ntBASIC4.88□□□□□ -1.63
H2afb2S4R1M3 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
H2afb2S4R1M3 Gm42598-201ENSMUST00000200110 2437 ntBASIC4.87□□□□□ -1.63
H2afb2S4R1M3 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
H2afb2S4R1M3 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
H2afb2S4R1M3 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
H2afb2S4R1M3 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
H2afb2S4R1M3 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC4.87□□□□□ -1.63
H2afb2S4R1M3 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
H2afb2S4R1M3 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
H2afb2S4R1M3 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC4.87□□□□□ -1.63
H2afb2S4R1M3 Gm14659-201ENSMUST00000117667 843 ntBASIC4.87□□□□□ -1.63
H2afb2S4R1M3 Gm7312-201ENSMUST00000118798 469 ntBASIC4.87□□□□□ -1.63
H2afb2S4R1M3 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
H2afb2S4R1M3 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC4.87□□□□□ -1.63
H2afb2S4R1M3 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
H2afb2S4R1M3 Gm21999-201ENSMUST00000165985 387 ntBASIC4.87□□□□□ -1.63
H2afb2S4R1M3 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC4.87□□□□□ -1.63
H2afb2S4R1M3 Gm24949-201ENSMUST00000183609 215 ntBASIC4.87□□□□□ -1.63
H2afb2S4R1M3 Gm8669-201ENSMUST00000183839 945 ntBASIC4.87□□□□□ -1.63
H2afb2S4R1M3 Mir6911-201ENSMUST00000184241 69 ntBASIC4.87□□□□□ -1.63
H2afb2S4R1M3 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC4.87□□□□□ -1.63
H2afb2S4R1M3 Igkv12-40-201ENSMUST00000199208 347 ntBASIC4.87□□□□□ -1.63
H2afb2S4R1M3 Gm20997-201ENSMUST00000205148 231 ntBASIC4.87□□□□□ -1.63
H2afb2S4R1M3 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC4.87□□□□□ -1.63
H2afb2S4R1M3 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC4.87□□□□□ -1.63
H2afb2S4R1M3 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC4.87□□□□□ -1.63
H2afb2S4R1M3 Gm9472-201ENSMUST00000221625 526 ntBASIC4.87□□□□□ -1.63
H2afb2S4R1M3 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC4.87□□□□□ -1.63
H2afb2S4R1M3 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
H2afb2S4R1M3 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
H2afb2S4R1M3 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
H2afb2S4R1M3 Gm24166-201ENSMUST00000082724 135 ntBASIC4.87□□□□□ -1.63
H2afb2S4R1M3 Mir337-201ENSMUST00000083592 97 ntBASIC4.87□□□□□ -1.63
H2afb2S4R1M3 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
H2afb2S4R1M3 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
H2afb2S4R1M3 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC4.87□□□□□ -1.63
H2afb2S4R1M3 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
H2afb2S4R1M3 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
H2afb2S4R1M3 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
H2afb2S4R1M3 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
H2afb2S4R1M3 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
H2afb2S4R1M3 AC112142.1-203ENSMUST00000228670 2472 ntBASIC4.87□□□□□ -1.63
H2afb2S4R1M3 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC4.87□□□□□ -1.63
H2afb2S4R1M3 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC4.87□□□□□ -1.63
H2afb2S4R1M3 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC4.87□□□□□ -1.63
H2afb2S4R1M3 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC4.87□□□□□ -1.63
H2afb2S4R1M3 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC4.87□□□□□ -1.63
H2afb2S4R1M3 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC4.87□□□□□ -1.63
H2afb2S4R1M3 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC4.87□□□□□ -1.63
H2afb2S4R1M3 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC4.87□□□□□ -1.63
H2afb2S4R1M3 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC4.87□□□□□ -1.63
H2afb2S4R1M3 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC4.87□□□□□ -1.63
H2afb2S4R1M3 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
H2afb2S4R1M3 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
H2afb2S4R1M3 AC107232.1-201ENSMUST00000227785 1503 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms