Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm25846-201ENSMUST00000158013 135 ntBASIC5.42□□□□□ -1.54
Vps28Q9D1C8 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC5.42□□□□□ -1.54
Vps28Q9D1C8 Gm18415-201ENSMUST00000177464 647 ntBASIC5.42□□□□□ -1.54
Vps28Q9D1C8 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC5.42□□□□□ -1.54
Vps28Q9D1C8 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Vps28Q9D1C8 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Vps28Q9D1C8 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC5.42□□□□□ -1.54
Vps28Q9D1C8 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC5.42□□□□□ -1.54
Vps28Q9D1C8 Ighv8-1-201ENSMUST00000194897 291 ntBASIC5.42□□□□□ -1.54
Vps28Q9D1C8 Gm37445-201ENSMUST00000195318 242 ntBASIC5.42□□□□□ -1.54
Vps28Q9D1C8 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC5.42□□□□□ -1.54
Vps28Q9D1C8 Gm18468-201ENSMUST00000207321 369 ntBASIC5.42□□□□□ -1.54
Vps28Q9D1C8 Gm18470-201ENSMUST00000207467 420 ntBASIC5.42□□□□□ -1.54
Vps28Q9D1C8 Gm18465-201ENSMUST00000207468 369 ntBASIC5.42□□□□□ -1.54
Vps28Q9D1C8 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC5.42□□□□□ -1.54
Vps28Q9D1C8 Gm18464-201ENSMUST00000207803 420 ntBASIC5.42□□□□□ -1.54
Vps28Q9D1C8 Gm18458-201ENSMUST00000207908 369 ntBASIC5.42□□□□□ -1.54
Vps28Q9D1C8 Gm18461-201ENSMUST00000208421 420 ntBASIC5.42□□□□□ -1.54
Vps28Q9D1C8 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC5.42□□□□□ -1.54
Vps28Q9D1C8 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC5.42□□□□□ -1.54
Vps28Q9D1C8 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC5.42□□□□□ -1.54
Vps28Q9D1C8 AC155808.1-201ENSMUST00000219288 409 ntBASIC5.42□□□□□ -1.54
Vps28Q9D1C8 AC158633.1-201ENSMUST00000219892 649 ntBASIC5.42□□□□□ -1.54
Vps28Q9D1C8 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC5.42□□□□□ -1.54
Vps28Q9D1C8 AC154627.3-201ENSMUST00000228441 334 ntBASIC5.42□□□□□ -1.54
Vps28Q9D1C8 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Vps28Q9D1C8 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Vps28Q9D1C8 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Vps28Q9D1C8 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Vps28Q9D1C8 CT025556.1-201ENSMUST00000222965 1884 ntBASIC5.42□□□□□ -1.54
Vps28Q9D1C8 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC5.42□□□□□ -1.54
Vps28Q9D1C8 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
Vps28Q9D1C8 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC5.42□□□□□ -1.54
Vps28Q9D1C8 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
Vps28Q9D1C8 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC5.42□□□□□ -1.54
Vps28Q9D1C8 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC5.42□□□□□ -1.54
Vps28Q9D1C8 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Vps28Q9D1C8 Gm45819-201ENSMUST00000210940 1751 ntBASIC5.42□□□□□ -1.54
Vps28Q9D1C8 Gm9577-201ENSMUST00000174655 2620 ntBASIC5.42□□□□□ -1.54
Vps28Q9D1C8 Gm37303-201ENSMUST00000194202 1559 ntBASIC5.42□□□□□ -1.54
Vps28Q9D1C8 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Vps28Q9D1C8 Gm45222-201ENSMUST00000207029 4307 ntBASIC5.42□□□□□ -1.54
Vps28Q9D1C8 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Vps28Q9D1C8 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC5.41□□□□□ -1.54
Vps28Q9D1C8 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Vps28Q9D1C8 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Vps28Q9D1C8 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Vps28Q9D1C8 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Vps28Q9D1C8 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC5.41□□□□□ -1.54
Vps28Q9D1C8 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Vps28Q9D1C8 Gm42841-201ENSMUST00000199806 1932 ntBASIC5.41□□□□□ -1.54
Vps28Q9D1C8 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Vps28Q9D1C8 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC5.41□□□□□ -1.54
Vps28Q9D1C8 Gm25595-201ENSMUST00000102273 97 ntBASIC5.41□□□□□ -1.54
Vps28Q9D1C8 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
Vps28Q9D1C8 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC5.41□□□□□ -1.54
Vps28Q9D1C8 Gm25176-201ENSMUST00000122640 125 ntBASIC5.41□□□□□ -1.54
Vps28Q9D1C8 Gm25047-201ENSMUST00000122667 104 ntBASIC5.41□□□□□ -1.54
Vps28Q9D1C8 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC5.41□□□□□ -1.54
Vps28Q9D1C8 Gm24860-201ENSMUST00000158457 276 ntBASIC5.41□□□□□ -1.54
Vps28Q9D1C8 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Vps28Q9D1C8 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC5.41□□□□□ -1.54
Vps28Q9D1C8 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC5.41□□□□□ -1.54
Vps28Q9D1C8 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC5.41□□□□□ -1.54
Vps28Q9D1C8 Gm18426-201ENSMUST00000191874 973 ntBASIC5.41□□□□□ -1.54
Vps28Q9D1C8 Gm37421-201ENSMUST00000193088 132 ntBASIC5.41□□□□□ -1.54
Vps28Q9D1C8 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC5.41□□□□□ -1.54
Vps28Q9D1C8 Mir6516-201ENSMUST00000196236 110 ntBASIC5.41□□□□□ -1.54
Vps28Q9D1C8 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Vps28Q9D1C8 Gm43717-201ENSMUST00000198684 310 ntBASIC5.41□□□□□ -1.54
Vps28Q9D1C8 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Vps28Q9D1C8 Gm17984-201ENSMUST00000205286 859 ntBASIC5.41□□□□□ -1.54
Vps28Q9D1C8 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC5.41□□□□□ -1.54
Vps28Q9D1C8 Gm45908-201ENSMUST00000212977 1177 ntBASIC5.41□□□□□ -1.54
Vps28Q9D1C8 AC173345.3-201ENSMUST00000221245 1093 ntBASIC5.41□□□□□ -1.54
Vps28Q9D1C8 AC098742.1-201ENSMUST00000227945 373 ntBASIC5.41□□□□□ -1.54
Vps28Q9D1C8 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Vps28Q9D1C8 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Vps28Q9D1C8 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC5.41□□□□□ -1.54
Vps28Q9D1C8 n-R5s62-201ENSMUST00000082780 96 ntBASIC5.41□□□□□ -1.54
Vps28Q9D1C8 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Vps28Q9D1C8 Gm43216-201ENSMUST00000196295 1333 ntBASIC5.41□□□□□ -1.54
Vps28Q9D1C8 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Vps28Q9D1C8 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Vps28Q9D1C8 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC5.41□□□□□ -1.54
Vps28Q9D1C8 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Vps28Q9D1C8 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Vps28Q9D1C8 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Vps28Q9D1C8 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Vps28Q9D1C8 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC5.41□□□□□ -1.54
Vps28Q9D1C8 Gm38067-201ENSMUST00000192346 1911 ntBASIC5.4□□□□□ -1.54
Vps28Q9D1C8 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC5.4□□□□□ -1.54
Vps28Q9D1C8 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
Vps28Q9D1C8 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Vps28Q9D1C8 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC5.4□□□□□ -1.54
Vps28Q9D1C8 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Vps28Q9D1C8 Gm22266-201ENSMUST00000104011 138 ntBASIC5.4□□□□□ -1.54
Vps28Q9D1C8 Gm16394-201ENSMUST00000117289 675 ntBASIC5.4□□□□□ -1.54
Vps28Q9D1C8 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC5.4□□□□□ -1.54
Vps28Q9D1C8 Gm16359-201ENSMUST00000124511 289 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms