Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm43781-201ENSMUST00000197634 2681 ntBASIC5.73□□□□□ -1.49
Smc1aQ9CU62 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Smc1aQ9CU62 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Smc1aQ9CU62 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Smc1aQ9CU62 AC115970.1-201ENSMUST00000218910 1758 ntBASIC5.73□□□□□ -1.49
Smc1aQ9CU62 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Smc1aQ9CU62 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Smc1aQ9CU62 Gm42535-201ENSMUST00000197312 1399 ntBASIC5.73□□□□□ -1.49
Smc1aQ9CU62 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Smc1aQ9CU62 Gm23274-201ENSMUST00000104056 130 ntBASIC5.73□□□□□ -1.49
Smc1aQ9CU62 Gm24429-201ENSMUST00000104076 132 ntBASIC5.73□□□□□ -1.49
Smc1aQ9CU62 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Smc1aQ9CU62 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
Smc1aQ9CU62 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Smc1aQ9CU62 Gm13162-201ENSMUST00000121481 454 ntBASIC5.73□□□□□ -1.49
Smc1aQ9CU62 Gm15171-201ENSMUST00000122191 334 ntBASIC5.73□□□□□ -1.49
Smc1aQ9CU62 Gm25293-201ENSMUST00000122792 285 ntBASIC5.73□□□□□ -1.49
Smc1aQ9CU62 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC5.73□□□□□ -1.49
Smc1aQ9CU62 Gm23513-201ENSMUST00000158181 133 ntBASIC5.73□□□□□ -1.49
Smc1aQ9CU62 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Smc1aQ9CU62 Gm25534-201ENSMUST00000175365 125 ntBASIC5.73□□□□□ -1.49
Smc1aQ9CU62 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Smc1aQ9CU62 Mir7012-201ENSMUST00000183900 64 ntBASIC5.73□□□□□ -1.49
Smc1aQ9CU62 Gm27636-201ENSMUST00000184528 122 ntBASIC5.73□□□□□ -1.49
Smc1aQ9CU62 Gm36638-201ENSMUST00000193295 400 ntBASIC5.73□□□□□ -1.49
Smc1aQ9CU62 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Smc1aQ9CU62 Gm44281-201ENSMUST00000203090 166 ntBASIC5.73□□□□□ -1.49
Smc1aQ9CU62 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC5.73□□□□□ -1.49
Smc1aQ9CU62 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC5.73□□□□□ -1.49
Smc1aQ9CU62 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC5.73□□□□□ -1.49
Smc1aQ9CU62 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC5.73□□□□□ -1.49
Smc1aQ9CU62 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Smc1aQ9CU62 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC5.73□□□□□ -1.49
Smc1aQ9CU62 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC5.73□□□□□ -1.49
Smc1aQ9CU62 Gm40598-201ENSMUST00000222953 547 ntBASIC5.73□□□□□ -1.49
Smc1aQ9CU62 CT025523.1-201ENSMUST00000228318 694 ntBASIC5.73□□□□□ -1.49
Smc1aQ9CU62 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Smc1aQ9CU62 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
Smc1aQ9CU62 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Smc1aQ9CU62 Gm37589-201ENSMUST00000193609 3994 ntBASIC5.73□□□□□ -1.49
Smc1aQ9CU62 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Smc1aQ9CU62 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Smc1aQ9CU62 Gm45644-201ENSMUST00000210255 2740 ntBASIC5.73□□□□□ -1.49
Smc1aQ9CU62 AC112274.1-201ENSMUST00000218957 4274 ntBASIC5.73□□□□□ -1.49
Smc1aQ9CU62 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Smc1aQ9CU62 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Smc1aQ9CU62 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
Smc1aQ9CU62 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Smc1aQ9CU62 Gm45222-201ENSMUST00000207029 4307 ntBASIC5.72□□□□□ -1.49
Smc1aQ9CU62 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Smc1aQ9CU62 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Smc1aQ9CU62 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Smc1aQ9CU62 Gm37181-201ENSMUST00000192513 1727 ntBASIC5.72□□□□□ -1.49
Smc1aQ9CU62 Gm24578-201ENSMUST00000103970 129 ntBASIC5.72□□□□□ -1.49
Smc1aQ9CU62 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Smc1aQ9CU62 Gm16420-201ENSMUST00000120258 856 ntBASIC5.72□□□□□ -1.49
Smc1aQ9CU62 Gm12413-201ENSMUST00000121508 312 ntBASIC5.72□□□□□ -1.49
Smc1aQ9CU62 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC5.72□□□□□ -1.49
Smc1aQ9CU62 Gm7281-201ENSMUST00000160010 543 ntBASIC5.72□□□□□ -1.49
Smc1aQ9CU62 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Smc1aQ9CU62 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC5.72□□□□□ -1.49
Smc1aQ9CU62 Gm8256-201ENSMUST00000169178 453 ntBASIC5.72□□□□□ -1.49
Smc1aQ9CU62 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Smc1aQ9CU62 Gm17711-201ENSMUST00000172028 237 ntBASIC5.72□□□□□ -1.49
Smc1aQ9CU62 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Smc1aQ9CU62 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Smc1aQ9CU62 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
Smc1aQ9CU62 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Smc1aQ9CU62 Gm28196-201ENSMUST00000187719 640 ntBASIC5.72□□□□□ -1.49
Smc1aQ9CU62 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Smc1aQ9CU62 Gm8874-201ENSMUST00000196826 286 ntBASIC5.72□□□□□ -1.49
Smc1aQ9CU62 Gm43717-201ENSMUST00000198684 310 ntBASIC5.72□□□□□ -1.49
Smc1aQ9CU62 Gm20997-201ENSMUST00000205148 231 ntBASIC5.72□□□□□ -1.49
Smc1aQ9CU62 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC5.72□□□□□ -1.49
Smc1aQ9CU62 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Smc1aQ9CU62 Gm6906-201ENSMUST00000218014 569 ntBASIC5.72□□□□□ -1.49
Smc1aQ9CU62 AC117240.2-201ENSMUST00000220921 263 ntBASIC5.72□□□□□ -1.49
Smc1aQ9CU62 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC5.72□□□□□ -1.49
Smc1aQ9CU62 AC165347.1-201ENSMUST00000224089 1025 ntBASIC5.72□□□□□ -1.49
Smc1aQ9CU62 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Smc1aQ9CU62 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Smc1aQ9CU62 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Smc1aQ9CU62 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Smc1aQ9CU62 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Smc1aQ9CU62 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Smc1aQ9CU62 Gm37180-201ENSMUST00000195335 2819 ntBASIC5.72□□□□□ -1.49
Smc1aQ9CU62 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Smc1aQ9CU62 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Smc1aQ9CU62 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC5.72□□□□□ -1.49
Smc1aQ9CU62 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC5.72□□□□□ -1.49
Smc1aQ9CU62 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC5.72□□□□□ -1.49
Smc1aQ9CU62 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC5.72□□□□□ -1.49
Smc1aQ9CU62 Gm45819-201ENSMUST00000210940 1751 ntBASIC5.72□□□□□ -1.49
Smc1aQ9CU62 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Smc1aQ9CU62 Gm29293-201ENSMUST00000189416 2188 ntBASIC5.72□□□□□ -1.49
Smc1aQ9CU62 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC5.71□□□□□ -1.49
Smc1aQ9CU62 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Smc1aQ9CU62 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Smc1aQ9CU62 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Smc1aQ9CU62 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms