Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm14933-201ENSMUST00000118840 481 ntBASIC6.73□□□□□ -1.33
Clp1Q99LI9 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC6.73□□□□□ -1.33
Clp1Q99LI9 Gm22214-201ENSMUST00000157563 172 ntBASIC6.73□□□□□ -1.33
Clp1Q99LI9 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
Clp1Q99LI9 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC6.73□□□□□ -1.33
Clp1Q99LI9 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC6.73□□□□□ -1.33
Clp1Q99LI9 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Clp1Q99LI9 Gm22932-201ENSMUST00000175510 72 ntBASIC6.73□□□□□ -1.33
Clp1Q99LI9 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC6.73□□□□□ -1.33
Clp1Q99LI9 Gm28779-201ENSMUST00000189678 323 ntBASIC6.73□□□□□ -1.33
Clp1Q99LI9 Gm17981-201ENSMUST00000191109 739 ntBASIC6.73□□□□□ -1.33
Clp1Q99LI9 Gm20770-201ENSMUST00000193474 694 ntBASIC6.73□□□□□ -1.33
Clp1Q99LI9 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Clp1Q99LI9 Gm43370-201ENSMUST00000196437 284 ntBASIC6.73□□□□□ -1.33
Clp1Q99LI9 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Clp1Q99LI9 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC6.73□□□□□ -1.33
Clp1Q99LI9 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC6.73□□□□□ -1.33
Clp1Q99LI9 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC6.73□□□□□ -1.33
Clp1Q99LI9 Gm6056-201ENSMUST00000221253 488 ntBASIC6.73□□□□□ -1.33
Clp1Q99LI9 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Clp1Q99LI9 Gm4963-201ENSMUST00000072718 378 ntBASIC6.73□□□□□ -1.33
Clp1Q99LI9 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Clp1Q99LI9 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC6.73□□□□□ -1.33
Clp1Q99LI9 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC6.73□□□□□ -1.33
Clp1Q99LI9 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC6.73□□□□□ -1.33
Clp1Q99LI9 Gm37775-201ENSMUST00000194120 2313 ntBASIC6.73□□□□□ -1.33
Clp1Q99LI9 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Clp1Q99LI9 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Clp1Q99LI9 Gm36947-201ENSMUST00000194709 2249 ntBASIC6.73□□□□□ -1.33
Clp1Q99LI9 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
Clp1Q99LI9 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Clp1Q99LI9 Gm43421-201ENSMUST00000200044 2905 ntBASIC6.73□□□□□ -1.33
Clp1Q99LI9 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Clp1Q99LI9 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
Clp1Q99LI9 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Clp1Q99LI9 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Clp1Q99LI9 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Clp1Q99LI9 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC6.72□□□□□ -1.33
Clp1Q99LI9 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Clp1Q99LI9 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Clp1Q99LI9 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Clp1Q99LI9 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Clp1Q99LI9 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Clp1Q99LI9 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Clp1Q99LI9 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Clp1Q99LI9 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Clp1Q99LI9 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Clp1Q99LI9 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Clp1Q99LI9 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Clp1Q99LI9 Zrsr1-201ENSMUST00000049506 3282 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Clp1Q99LI9 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Clp1Q99LI9 Gm37541-201ENSMUST00000192464 2315 ntBASIC6.72□□□□□ -1.33
Clp1Q99LI9 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC6.72□□□□□ -1.33
Clp1Q99LI9 Olfr1426-207ENSMUST00000220005 2466 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Clp1Q99LI9 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Clp1Q99LI9 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Clp1Q99LI9 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Clp1Q99LI9 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Clp1Q99LI9 Gm44708-201ENSMUST00000205580 2237 ntBASIC6.72□□□□□ -1.33
Clp1Q99LI9 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Clp1Q99LI9 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Clp1Q99LI9 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Clp1Q99LI9 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC6.72□□□□□ -1.33
Clp1Q99LI9 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC6.72□□□□□ -1.33
Clp1Q99LI9 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC6.72□□□□□ -1.33
Clp1Q99LI9 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Clp1Q99LI9 Lipe-203ENSMUST00000105177 1251 ntBASIC6.72□□□□□ -1.33
Clp1Q99LI9 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
Clp1Q99LI9 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Clp1Q99LI9 Gm13349-201ENSMUST00000118436 411 ntBASIC6.72□□□□□ -1.33
Clp1Q99LI9 Gm14793-201ENSMUST00000118739 311 ntBASIC6.72□□□□□ -1.33
Clp1Q99LI9 Gm14876-201ENSMUST00000120795 327 ntBASIC6.72□□□□□ -1.33
Clp1Q99LI9 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Clp1Q99LI9 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Clp1Q99LI9 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC6.72□□□□□ -1.33
Clp1Q99LI9 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
Clp1Q99LI9 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Clp1Q99LI9 Gm23662-201ENSMUST00000158046 111 ntBASIC6.72□□□□□ -1.33
Clp1Q99LI9 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Clp1Q99LI9 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Clp1Q99LI9 Gm3084-201ENSMUST00000169967 598 ntBASIC6.72□□□□□ -1.33
Clp1Q99LI9 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
Clp1Q99LI9 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
Clp1Q99LI9 Gm22166-201ENSMUST00000178419 121 ntBASIC6.72□□□□□ -1.33
Clp1Q99LI9 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Clp1Q99LI9 Gm23288-201ENSMUST00000179213 121 ntBASIC6.72□□□□□ -1.33
Clp1Q99LI9 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Clp1Q99LI9 Gm17929-201ENSMUST00000186851 627 ntBASIC6.72□□□□□ -1.33
Clp1Q99LI9 Gm28628-201ENSMUST00000187006 264 ntBASIC6.72□□□□□ -1.33
Clp1Q99LI9 Gm29160-201ENSMUST00000190094 699 ntBASIC6.72□□□□□ -1.33
Clp1Q99LI9 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC6.72□□□□□ -1.33
Clp1Q99LI9 Gm36998-201ENSMUST00000193205 704 ntBASIC6.72□□□□□ -1.33
Clp1Q99LI9 Gm19089-201ENSMUST00000197207 613 ntBASIC6.72□□□□□ -1.33
Clp1Q99LI9 Trav3n-2-201ENSMUST00000197693 334 ntBASIC6.72□□□□□ -1.33
Clp1Q99LI9 Trav3d-2-201ENSMUST00000199874 334 ntBASIC6.72□□□□□ -1.33
Clp1Q99LI9 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC6.72□□□□□ -1.33
Clp1Q99LI9 Gm4874-201ENSMUST00000203589 691 ntBASIC6.72□□□□□ -1.33
Clp1Q99LI9 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC6.72□□□□□ -1.33
Clp1Q99LI9 Gm45400-201ENSMUST00000211603 653 ntBASIC6.72□□□□□ -1.33
Clp1Q99LI9 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC6.72□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms