Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm18415-201ENSMUST00000177464 647 ntBASIC6.25□□□□□ -1.41
Vps53Q8CCB4 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC6.25□□□□□ -1.41
Vps53Q8CCB4 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Vps53Q8CCB4 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Vps53Q8CCB4 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Vps53Q8CCB4 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC6.25□□□□□ -1.41
Vps53Q8CCB4 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC6.25□□□□□ -1.41
Vps53Q8CCB4 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC6.25□□□□□ -1.41
Vps53Q8CCB4 Ighv1-35-201ENSMUST00000195265 351 ntBASIC6.25□□□□□ -1.41
Vps53Q8CCB4 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC6.25□□□□□ -1.41
Vps53Q8CCB4 Gm42796-201ENSMUST00000199913 1087 ntBASIC6.25□□□□□ -1.41
Vps53Q8CCB4 Gm43629-201ENSMUST00000201782 704 ntBASIC6.25□□□□□ -1.41
Vps53Q8CCB4 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Vps53Q8CCB4 Gm19921-201ENSMUST00000210505 703 ntBASIC6.25□□□□□ -1.41
Vps53Q8CCB4 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC6.25□□□□□ -1.41
Vps53Q8CCB4 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC6.25□□□□□ -1.41
Vps53Q8CCB4 AC158803.2-201ENSMUST00000219452 679 ntBASIC6.25□□□□□ -1.41
Vps53Q8CCB4 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Vps53Q8CCB4 AC153646.1-201ENSMUST00000223229 1279 ntBASIC6.25□□□□□ -1.41
Vps53Q8CCB4 AC134860.4-201ENSMUST00000223592 978 ntBASIC6.25□□□□□ -1.41
Vps53Q8CCB4 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Vps53Q8CCB4 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Vps53Q8CCB4 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Vps53Q8CCB4 Gm42852-201ENSMUST00000202649 1379 ntBASIC6.25□□□□□ -1.41
Vps53Q8CCB4 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Vps53Q8CCB4 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC6.25□□□□□ -1.41
Vps53Q8CCB4 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Vps53Q8CCB4 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Vps53Q8CCB4 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Vps53Q8CCB4 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Vps53Q8CCB4 Gm37217-201ENSMUST00000194017 3521 ntBASIC6.25□□□□□ -1.41
Vps53Q8CCB4 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Vps53Q8CCB4 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Vps53Q8CCB4 Gm44751-201ENSMUST00000208302 4387 ntBASIC6.25□□□□□ -1.41
Vps53Q8CCB4 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Vps53Q8CCB4 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Vps53Q8CCB4 AW046200-203ENSMUST00000211787 2479 ntBASIC6.24□□□□□ -1.41
Vps53Q8CCB4 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Vps53Q8CCB4 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Vps53Q8CCB4 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Vps53Q8CCB4 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Vps53Q8CCB4 Gm9597-202ENSMUST00000227632 1387 ntBASIC6.24□□□□□ -1.41
Vps53Q8CCB4 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Vps53Q8CCB4 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Vps53Q8CCB4 Gm14472-201ENSMUST00000119815 282 ntBASIC6.24□□□□□ -1.41
Vps53Q8CCB4 Gm15428-201ENSMUST00000121352 333 ntBASIC6.24□□□□□ -1.41
Vps53Q8CCB4 Gm12110-201ENSMUST00000121601 579 ntBASIC6.24□□□□□ -1.41
Vps53Q8CCB4 Gm23587-201ENSMUST00000157658 84 ntBASIC6.24□□□□□ -1.41
Vps53Q8CCB4 Gm4540-201ENSMUST00000170669 429 ntBASIC6.24□□□□□ -1.41
Vps53Q8CCB4 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Vps53Q8CCB4 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Vps53Q8CCB4 Mir5103-201ENSMUST00000175111 79 ntBASIC6.24□□□□□ -1.41
Vps53Q8CCB4 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Vps53Q8CCB4 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Vps53Q8CCB4 Gm27037-201ENSMUST00000182270 960 ntBASIC6.24□□□□□ -1.41
Vps53Q8CCB4 Gm18342-201ENSMUST00000186987 694 ntBASIC6.24□□□□□ -1.41
Vps53Q8CCB4 Gm28976-201ENSMUST00000188070 144 ntBASIC6.24□□□□□ -1.41
Vps53Q8CCB4 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Vps53Q8CCB4 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC6.24□□□□□ -1.41
Vps53Q8CCB4 Gm2427-201ENSMUST00000189121 881 ntBASIC6.24□□□□□ -1.41
Vps53Q8CCB4 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC6.24□□□□□ -1.41
Vps53Q8CCB4 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC6.24□□□□□ -1.41
Vps53Q8CCB4 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC6.24□□□□□ -1.41
Vps53Q8CCB4 Gm43922-201ENSMUST00000205071 328 ntBASIC6.24□□□□□ -1.41
Vps53Q8CCB4 Gm45660-201ENSMUST00000210267 151 ntBASIC6.24□□□□□ -1.41
Vps53Q8CCB4 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC6.24□□□□□ -1.41
Vps53Q8CCB4 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC6.24□□□□□ -1.41
Vps53Q8CCB4 Gm45722-201ENSMUST00000213075 466 ntBASIC6.24□□□□□ -1.41
Vps53Q8CCB4 CU024910.1-201ENSMUST00000214310 418 ntBASIC6.24□□□□□ -1.41
Vps53Q8CCB4 AC147639.1-201ENSMUST00000224216 661 ntBASIC6.24□□□□□ -1.41
Vps53Q8CCB4 AC129085.4-201ENSMUST00000224536 570 ntBASIC6.24□□□□□ -1.41
Vps53Q8CCB4 Zfp429-203ENSMUST00000224684 524 ntBASIC6.24□□□□□ -1.41
Vps53Q8CCB4 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Vps53Q8CCB4 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Vps53Q8CCB4 Gm6195-201ENSMUST00000063059 357 ntBASIC6.24□□□□□ -1.41
Vps53Q8CCB4 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Vps53Q8CCB4 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Vps53Q8CCB4 Gm5471-201ENSMUST00000072732 337 ntBASIC6.24□□□□□ -1.41
Vps53Q8CCB4 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Vps53Q8CCB4 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Vps53Q8CCB4 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Vps53Q8CCB4 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC6.24□□□□□ -1.41
Vps53Q8CCB4 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
Vps53Q8CCB4 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Vps53Q8CCB4 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Vps53Q8CCB4 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Vps53Q8CCB4 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
Vps53Q8CCB4 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
Vps53Q8CCB4 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC6.23□□□□□ -1.41
Vps53Q8CCB4 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC6.23□□□□□ -1.41
Vps53Q8CCB4 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Vps53Q8CCB4 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Vps53Q8CCB4 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Vps53Q8CCB4 Gm44518-201ENSMUST00000208080 4370 ntBASIC6.23□□□□□ -1.41
Vps53Q8CCB4 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Vps53Q8CCB4 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Vps53Q8CCB4 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC6.23□□□□□ -1.41
Vps53Q8CCB4 Gm11278-201ENSMUST00000121002 997 ntBASIC6.23□□□□□ -1.41
Vps53Q8CCB4 Gm12222-201ENSMUST00000121368 260 ntBASIC6.23□□□□□ -1.41
Vps53Q8CCB4 Gm15152-201ENSMUST00000121540 394 ntBASIC6.23□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms