Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Mup-ps1-201ENSMUST00000120720 544 ntBASIC5.83□□□□□ -1.48
Trim9Q8C7M3 Gm14623-201ENSMUST00000121398 603 ntBASIC5.83□□□□□ -1.48
Trim9Q8C7M3 Gm11910-201ENSMUST00000121624 432 ntBASIC5.83□□□□□ -1.48
Trim9Q8C7M3 Gm8061-201ENSMUST00000122380 350 ntBASIC5.83□□□□□ -1.48
Trim9Q8C7M3 n-R5s98-201ENSMUST00000122549 119 ntBASIC5.83□□□□□ -1.48
Trim9Q8C7M3 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC5.83□□□□□ -1.48
Trim9Q8C7M3 Gm16026-202ENSMUST00000159695 772 ntBASIC5.83□□□□□ -1.48
Trim9Q8C7M3 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC5.83□□□□□ -1.48
Trim9Q8C7M3 Gm27960-201ENSMUST00000183445 184 ntBASIC5.83□□□□□ -1.48
Trim9Q8C7M3 Gm27820-201ENSMUST00000183628 175 ntBASIC5.83□□□□□ -1.48
Trim9Q8C7M3 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC5.83□□□□□ -1.48
Trim9Q8C7M3 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC5.83□□□□□ -1.48
Trim9Q8C7M3 Gm9332-201ENSMUST00000198431 730 ntBASIC5.83□□□□□ -1.48
Trim9Q8C7M3 Gm45246-201ENSMUST00000210820 367 ntBASIC5.83□□□□□ -1.48
Trim9Q8C7M3 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC5.83□□□□□ -1.48
Trim9Q8C7M3 Gm46136-201ENSMUST00000214730 565 ntBASIC5.83□□□□□ -1.48
Trim9Q8C7M3 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC5.83□□□□□ -1.48
Trim9Q8C7M3 AC122035.2-201ENSMUST00000228698 462 ntBASIC5.83□□□□□ -1.48
Trim9Q8C7M3 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Trim9Q8C7M3 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Trim9Q8C7M3 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Trim9Q8C7M3 Mir20a-201ENSMUST00000083508 107 ntBASIC5.83□□□□□ -1.48
Trim9Q8C7M3 Mir449a-201ENSMUST00000083641 91 ntBASIC5.83□□□□□ -1.48
Trim9Q8C7M3 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC5.83□□□□□ -1.48
Trim9Q8C7M3 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Trim9Q8C7M3 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Trim9Q8C7M3 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC5.83□□□□□ -1.48
Trim9Q8C7M3 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.83□□□□□ -1.48
Trim9Q8C7M3 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Trim9Q8C7M3 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Trim9Q8C7M3 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
Trim9Q8C7M3 Gm6645-201ENSMUST00000118505 2726 ntBASIC5.83□□□□□ -1.48
Trim9Q8C7M3 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Trim9Q8C7M3 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC5.83□□□□□ -1.48
Trim9Q8C7M3 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Trim9Q8C7M3 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Trim9Q8C7M3 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Gm26067-201ENSMUST00000103789 110 ntBASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Gm11393-201ENSMUST00000118019 288 ntBASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Gm11991-201ENSMUST00000119652 1074 ntBASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Gm12287-201ENSMUST00000119770 707 ntBASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Gm12074-201ENSMUST00000120189 219 ntBASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Gm11387-201ENSMUST00000120266 772 ntBASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Gm12007-201ENSMUST00000120978 597 ntBASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Gm13533-201ENSMUST00000121104 177 ntBASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Gm11358-201ENSMUST00000122310 373 ntBASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Trim9Q8C7M3 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC5.82□□□□□ -1.48
Trim9Q8C7M3 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Gm24065-201ENSMUST00000157487 264 ntBASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Gm23387-201ENSMUST00000158586 107 ntBASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Gm17142-201ENSMUST00000164933 645 ntBASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Mir3097-201ENSMUST00000175356 67 ntBASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Gm24754-201ENSMUST00000177997 107 ntBASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Gm24925-201ENSMUST00000178157 107 ntBASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Gm27715-201ENSMUST00000184714 260 ntBASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Mir7087-201ENSMUST00000184840 70 ntBASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Gm37492-201ENSMUST00000191948 376 ntBASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Gm5285-201ENSMUST00000193089 666 ntBASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Gm6321-201ENSMUST00000194460 1090 ntBASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Gm6064-201ENSMUST00000203999 454 ntBASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC5.82□□□□□ -1.48
Trim9Q8C7M3 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Trim9Q8C7M3 AC122332.1-201ENSMUST00000214384 285 ntBASIC5.82□□□□□ -1.48
Trim9Q8C7M3 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC5.82□□□□□ -1.48
Trim9Q8C7M3 AC111046.1-201ENSMUST00000217715 412 ntBASIC5.82□□□□□ -1.48
Trim9Q8C7M3 AC153505.2-201ENSMUST00000217741 277 ntBASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC5.82□□□□□ -1.48
Trim9Q8C7M3 AC129085.4-201ENSMUST00000224536 570 ntBASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC5.82□□□□□ -1.48
Trim9Q8C7M3 AC164116.2-201ENSMUST00000225398 1038 ntBASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Gm25810-201ENSMUST00000082752 108 ntBASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Gm9408-201ENSMUST00000197375 1505 ntBASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Gm43210-201ENSMUST00000196743 6152 ntBASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Trim9Q8C7M3 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms