Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Usp47Q8BY87 AC153532.2-201ENSMUST00000219753 3844 ntBASIC6.83□□□□□ -1.32
Usp47Q8BY87 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Usp47Q8BY87 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Usp47Q8BY87 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC6.83□□□□□ -1.32
Usp47Q8BY87 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Usp47Q8BY87 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
Usp47Q8BY87 AC116797.2-201ENSMUST00000224763 4221 ntBASIC6.83□□□□□ -1.32
Usp47Q8BY87 Gm13745-201ENSMUST00000121994 527 ntBASIC6.82□□□□□ -1.32
Usp47Q8BY87 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC6.82□□□□□ -1.32
Usp47Q8BY87 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC6.82□□□□□ -1.32
Usp47Q8BY87 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC6.82□□□□□ -1.32
Usp47Q8BY87 Gm17152-201ENSMUST00000172430 535 ntBASIC6.82□□□□□ -1.32
Usp47Q8BY87 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Usp47Q8BY87 Gm4557-201ENSMUST00000185826 907 ntBASIC6.82□□□□□ -1.32
Usp47Q8BY87 Gm4526-201ENSMUST00000186039 920 ntBASIC6.82□□□□□ -1.32
Usp47Q8BY87 Gm4412-201ENSMUST00000186660 433 ntBASIC6.82□□□□□ -1.32
Usp47Q8BY87 Stk-ps2-204ENSMUST00000187808 616 ntBASIC6.82□□□□□ -1.32
Usp47Q8BY87 Gm8708-201ENSMUST00000188500 906 ntBASIC6.82□□□□□ -1.32
Usp47Q8BY87 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC6.82□□□□□ -1.32
Usp47Q8BY87 Gm37491-201ENSMUST00000192552 1111 ntBASIC6.82□□□□□ -1.32
Usp47Q8BY87 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC6.82□□□□□ -1.32
Usp47Q8BY87 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC6.82□□□□□ -1.32
Usp47Q8BY87 Gm45236-201ENSMUST00000208632 229 ntBASIC6.82□□□□□ -1.32
Usp47Q8BY87 Gm45610-201ENSMUST00000209227 784 ntBASIC6.82□□□□□ -1.32
Usp47Q8BY87 Gm19170-201ENSMUST00000212440 1084 ntBASIC6.82□□□□□ -1.32
Usp47Q8BY87 CR974592.1-201ENSMUST00000220422 574 ntBASIC6.82□□□□□ -1.32
Usp47Q8BY87 Gm19095-201ENSMUST00000220533 730 ntBASIC6.82□□□□□ -1.32
Usp47Q8BY87 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Usp47Q8BY87 AC164618.1-201ENSMUST00000225769 592 ntBASIC6.82□□□□□ -1.32
Usp47Q8BY87 AC154484.2-201ENSMUST00000228359 818 ntBASIC6.82□□□□□ -1.32
Usp47Q8BY87 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Usp47Q8BY87 Gm10115-201ENSMUST00000076071 1228 ntBASIC6.82□□□□□ -1.32
Usp47Q8BY87 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Usp47Q8BY87 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Usp47Q8BY87 Gm37749-201ENSMUST00000193917 1899 ntBASIC6.82□□□□□ -1.32
Usp47Q8BY87 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Usp47Q8BY87 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Usp47Q8BY87 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Usp47Q8BY87 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Usp47Q8BY87 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Usp47Q8BY87 Gm24125-201ENSMUST00000104105 137 ntBASIC6.82□□□□□ -1.32
Usp47Q8BY87 Gm14756-201ENSMUST00000116395 240 ntBASIC6.82□□□□□ -1.32
Usp47Q8BY87 Gm12245-201ENSMUST00000117266 357 ntBASIC6.82□□□□□ -1.32
Usp47Q8BY87 Gm12073-201ENSMUST00000117382 524 ntBASIC6.82□□□□□ -1.32
Usp47Q8BY87 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC6.82□□□□□ -1.32
Usp47Q8BY87 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC6.82□□□□□ -1.32
Usp47Q8BY87 Gm21850-201ENSMUST00000179792 359 ntBASIC6.82□□□□□ -1.32
Usp47Q8BY87 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC6.82□□□□□ -1.32
Usp47Q8BY87 Gm20954-201ENSMUST00000189078 644 ntBASIC6.82□□□□□ -1.32
Usp47Q8BY87 Gm29138-201ENSMUST00000191444 348 ntBASIC6.82□□□□□ -1.32
Usp47Q8BY87 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC6.82□□□□□ -1.32
Usp47Q8BY87 AL589696.1-201ENSMUST00000225711 330 ntBASIC6.82□□□□□ -1.32
Usp47Q8BY87 AC154335.2-201ENSMUST00000225916 638 ntBASIC6.82□□□□□ -1.32
Usp47Q8BY87 AC098742.1-201ENSMUST00000227945 373 ntBASIC6.82□□□□□ -1.32
Usp47Q8BY87 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Usp47Q8BY87 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Usp47Q8BY87 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Usp47Q8BY87 Snord59a-201ENSMUST00000082844 74 ntBASIC6.82□□□□□ -1.32
Usp47Q8BY87 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Usp47Q8BY87 AC122357.1-201ENSMUST00000221652 1515 ntBASIC6.81□□□□□ -1.32
Usp47Q8BY87 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Usp47Q8BY87 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Usp47Q8BY87 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Usp47Q8BY87 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC6.81□□□□□ -1.32
Usp47Q8BY87 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC6.81□□□□□ -1.32
Usp47Q8BY87 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
Usp47Q8BY87 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Usp47Q8BY87 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC6.81□□□□□ -1.32
Usp47Q8BY87 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Usp47Q8BY87 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Usp47Q8BY87 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Usp47Q8BY87 AC124556.1-201ENSMUST00000218256 1319 ntBASIC6.81□□□□□ -1.32
Usp47Q8BY87 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
Usp47Q8BY87 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Usp47Q8BY87 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Usp47Q8BY87 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC6.81□□□□□ -1.32
Usp47Q8BY87 Gm9294-201ENSMUST00000165198 789 ntBASIC6.81□□□□□ -1.32
Usp47Q8BY87 Mir6410-201ENSMUST00000184204 104 ntBASIC6.81□□□□□ -1.32
Usp47Q8BY87 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC6.81□□□□□ -1.32
Usp47Q8BY87 Gm43144-201ENSMUST00000198256 485 ntBASIC6.81□□□□□ -1.32
Usp47Q8BY87 Gm18011-201ENSMUST00000203717 565 ntBASIC6.81□□□□□ -1.32
Usp47Q8BY87 Gm2522-201ENSMUST00000204280 322 ntBASIC6.81□□□□□ -1.32
Usp47Q8BY87 Gm23300-201ENSMUST00000082712 125 ntBASIC6.81□□□□□ -1.32
Usp47Q8BY87 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC6.81□□□□□ -1.32
Usp47Q8BY87 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Usp47Q8BY87 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Usp47Q8BY87 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC6.8□□□□□ -1.32
Usp47Q8BY87 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
Usp47Q8BY87 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
Usp47Q8BY87 Gm35629-201ENSMUST00000209684 2241 ntBASIC6.8□□□□□ -1.32
Usp47Q8BY87 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Usp47Q8BY87 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
Usp47Q8BY87 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC6.8□□□□□ -1.32
Usp47Q8BY87 Gm13932-201ENSMUST00000120873 610 ntBASIC6.8□□□□□ -1.32
Usp47Q8BY87 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC6.8□□□□□ -1.32
Usp47Q8BY87 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Usp47Q8BY87 Gm21856-201ENSMUST00000187547 696 ntBASIC6.8□□□□□ -1.32
Usp47Q8BY87 Gm21735-201ENSMUST00000190360 696 ntBASIC6.8□□□□□ -1.32
Usp47Q8BY87 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC6.8□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 100.1 ms