Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm29058-201ENSMUST00000189510 615 ntBASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Gm29624-201ENSMUST00000190018 615 ntBASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Gm28780-201ENSMUST00000190223 615 ntBASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Gm28969-211ENSMUST00000190992 615 ntBASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Gm28990-207ENSMUST00000191219 615 ntBASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Gm36468-201ENSMUST00000192119 615 ntBASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Gm31572-201ENSMUST00000193341 615 ntBASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Gm30175-201ENSMUST00000194173 615 ntBASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Gm30858-201ENSMUST00000195516 615 ntBASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Gm42625-201ENSMUST00000198611 922 ntBASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Gm44733-202ENSMUST00000209063 582 ntTSL 5 BASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Gm45276-201ENSMUST00000209549 1086 ntBASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 AC121599.1-201ENSMUST00000224276 449 ntBASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 CT025579.3-201ENSMUST00000224543 451 ntBASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Gm44587-201ENSMUST00000207399 1685 ntBASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Gm43065-201ENSMUST00000198971 2092 ntBASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 AC160931.3-201ENSMUST00000222111 2267 ntBASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Gm37726-201ENSMUST00000193246 3886 ntBASIC5.36□□□□□ -1.55
Ccdc40Q8BI79 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Ccdc40Q8BI79 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Ccdc40Q8BI79 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Ccdc40Q8BI79 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ccdc40Q8BI79 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC5.35□□□□□ -1.55
Ccdc40Q8BI79 Gm44433-201ENSMUST00000203540 4832 ntBASIC5.35□□□□□ -1.55
Ccdc40Q8BI79 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Ccdc40Q8BI79 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Ccdc40Q8BI79 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Ccdc40Q8BI79 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ccdc40Q8BI79 Gm18719-201ENSMUST00000196696 1413 ntBASIC5.35□□□□□ -1.55
Ccdc40Q8BI79 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
Ccdc40Q8BI79 Gm11325-201ENSMUST00000119967 469 ntBASIC5.35□□□□□ -1.55
Ccdc40Q8BI79 Gm11255-201ENSMUST00000120448 1180 ntBASIC5.35□□□□□ -1.55
Ccdc40Q8BI79 Gm14619-201ENSMUST00000120480 168 ntBASIC5.35□□□□□ -1.55
Ccdc40Q8BI79 Gm14229-201ENSMUST00000121178 850 ntBASIC5.35□□□□□ -1.55
Ccdc40Q8BI79 Gm25290-201ENSMUST00000122796 144 ntBASIC5.35□□□□□ -1.55
Ccdc40Q8BI79 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC5.35□□□□□ -1.55
Ccdc40Q8BI79 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC5.35□□□□□ -1.55
Ccdc40Q8BI79 Gm24690-201ENSMUST00000157759 97 ntBASIC5.35□□□□□ -1.55
Ccdc40Q8BI79 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC5.35□□□□□ -1.55
Ccdc40Q8BI79 Gm27541-201ENSMUST00000184078 122 ntBASIC5.35□□□□□ -1.55
Ccdc40Q8BI79 Mir7087-201ENSMUST00000184840 70 ntBASIC5.35□□□□□ -1.55
Ccdc40Q8BI79 Gm28116-201ENSMUST00000189064 387 ntBASIC5.35□□□□□ -1.55
Ccdc40Q8BI79 Gm37681-201ENSMUST00000193880 727 ntBASIC5.35□□□□□ -1.55
Ccdc40Q8BI79 Gm18867-201ENSMUST00000198022 1179 ntBASIC5.35□□□□□ -1.55
Ccdc40Q8BI79 Gm38670-201ENSMUST00000199248 77 ntBASIC5.35□□□□□ -1.55
Ccdc40Q8BI79 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Ccdc40Q8BI79 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC5.35□□□□□ -1.55
Ccdc40Q8BI79 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Ccdc40Q8BI79 AC160031.1-201ENSMUST00000219914 522 ntBASIC5.35□□□□□ -1.55
Ccdc40Q8BI79 AC132433.1-201ENSMUST00000221553 1101 ntBASIC5.35□□□□□ -1.55
Ccdc40Q8BI79 AC165953.1-201ENSMUST00000226386 357 ntBASIC5.35□□□□□ -1.55
Ccdc40Q8BI79 AC123665.6-201ENSMUST00000228568 538 ntBASIC5.35□□□□□ -1.55
Ccdc40Q8BI79 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ccdc40Q8BI79 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Ccdc40Q8BI79 Mir331-201ENSMUST00000083673 96 ntBASIC5.35□□□□□ -1.55
Ccdc40Q8BI79 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Ccdc40Q8BI79 Gm44235-201ENSMUST00000204312 3058 ntBASIC5.35□□□□□ -1.55
Ccdc40Q8BI79 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
Ccdc40Q8BI79 Gm37562-201ENSMUST00000194763 4328 ntBASIC5.35□□□□□ -1.55
Ccdc40Q8BI79 CT025710.1-201ENSMUST00000222949 2533 ntBASIC5.35□□□□□ -1.55
Ccdc40Q8BI79 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
Ccdc40Q8BI79 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Ccdc40Q8BI79 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Ccdc40Q8BI79 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC5.34□□□□□ -1.55
Ccdc40Q8BI79 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC5.34□□□□□ -1.55
Ccdc40Q8BI79 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC5.34□□□□□ -1.55
Ccdc40Q8BI79 Gm42559-201ENSMUST00000201811 3532 ntBASIC5.34□□□□□ -1.55
Ccdc40Q8BI79 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC5.34□□□□□ -1.55
Ccdc40Q8BI79 Gm42661-201ENSMUST00000202364 1442 ntBASIC5.34□□□□□ -1.55
Ccdc40Q8BI79 Gm42561-201ENSMUST00000202563 1442 ntBASIC5.34□□□□□ -1.55
Ccdc40Q8BI79 Smc5-206ENSMUST00000226111 3265 ntBASIC5.34□□□□□ -1.55
Ccdc40Q8BI79 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ccdc40Q8BI79 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Ccdc40Q8BI79 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ccdc40Q8BI79 Gm24350-201ENSMUST00000104163 133 ntBASIC5.34□□□□□ -1.55
Ccdc40Q8BI79 Gm11975-201ENSMUST00000118772 481 ntBASIC5.34□□□□□ -1.55
Ccdc40Q8BI79 Gm11510-201ENSMUST00000120278 347 ntBASIC5.34□□□□□ -1.55
Ccdc40Q8BI79 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC5.34□□□□□ -1.55
Ccdc40Q8BI79 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ccdc40Q8BI79 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ccdc40Q8BI79 Gm22804-201ENSMUST00000158052 101 ntBASIC5.34□□□□□ -1.55
Ccdc40Q8BI79 Gm24295-201ENSMUST00000158298 131 ntBASIC5.34□□□□□ -1.55
Ccdc40Q8BI79 Gm25348-201ENSMUST00000158961 111 ntBASIC5.34□□□□□ -1.55
Ccdc40Q8BI79 Gm28859-201ENSMUST00000186650 616 ntBASIC5.34□□□□□ -1.55
Ccdc40Q8BI79 Gm28683-201ENSMUST00000187134 615 ntBASIC5.34□□□□□ -1.55
Ccdc40Q8BI79 Gm28974-201ENSMUST00000187893 231 ntBASIC5.34□□□□□ -1.55
Ccdc40Q8BI79 Gm7266-201ENSMUST00000187999 405 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms