Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm13230-201ENSMUST00000120870 1575 ntBASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Slco6b1-202ENSMUST00000178359 1778 ntBASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 CT009757.5-201ENSMUST00000221858 3425 ntBASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Gm24888-201ENSMUST00000104387 130 ntBASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Gm11914-201ENSMUST00000117094 507 ntBASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Gm15765-201ENSMUST00000118407 910 ntBASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Gm13679-201ENSMUST00000118678 484 ntBASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Gm15149-201ENSMUST00000119370 360 ntBASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Gm12244-201ENSMUST00000119500 291 ntBASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Gm9085-201ENSMUST00000119994 1072 ntBASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Gm14620-201ENSMUST00000120656 383 ntBASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Gm13642-201ENSMUST00000121697 381 ntBASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Gm18833-201ENSMUST00000173218 862 ntBASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Gm26557-201ENSMUST00000180756 493 ntBASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Gm29563-201ENSMUST00000187249 496 ntBASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Gm8860-201ENSMUST00000193160 445 ntBASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Gm8999-201ENSMUST00000204951 969 ntBASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Gm45228-201ENSMUST00000206585 352 ntBASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Gm29920-201ENSMUST00000206876 754 ntBASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Gm18600-201ENSMUST00000207205 505 ntBASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Gm18628-201ENSMUST00000220584 475 ntBASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 AC211878.1-201ENSMUST00000221668 474 ntBASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Gm25410-201ENSMUST00000083758 137 ntBASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Gm44697-201ENSMUST00000207756 1679 ntBASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Gm37076-201ENSMUST00000192033 2294 ntBASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
Sh3rf1Q69ZI1 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 AC160029.1-201ENSMUST00000219628 2678 ntBASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Rnu11-201ENSMUST00000104135 134 ntBASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Gm11902-201ENSMUST00000118849 270 ntBASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Gm14783-201ENSMUST00000118900 663 ntBASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Gm14925-201ENSMUST00000120611 438 ntBASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Gm15502-201ENSMUST00000121449 208 ntBASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Gm14784-201ENSMUST00000121604 663 ntBASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Gm15885-201ENSMUST00000122114 388 ntBASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Gm15300-201ENSMUST00000122324 279 ntBASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 n-R5s201-201ENSMUST00000122622 116 ntBASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Gm15899-201ENSMUST00000128586 238 ntBASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Gm23071-201ENSMUST00000158242 115 ntBASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Gm25904-201ENSMUST00000158491 143 ntBASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Sh3rf1Q69ZI1 Gm8837-201ENSMUST00000161037 1107 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms