Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC5.27□□□□□ -1.57
Upf3bQ3ULL6 Gm26490-201ENSMUST00000157879 140 ntBASIC5.27□□□□□ -1.57
Upf3bQ3ULL6 Gm24944-201ENSMUST00000158330 128 ntBASIC5.27□□□□□ -1.57
Upf3bQ3ULL6 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Upf3bQ3ULL6 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Upf3bQ3ULL6 Gm18828-202ENSMUST00000181035 310 ntBASIC5.27□□□□□ -1.57
Upf3bQ3ULL6 Gm27762-201ENSMUST00000183417 109 ntBASIC5.27□□□□□ -1.57
Upf3bQ3ULL6 Gm20056-201ENSMUST00000194813 519 ntBASIC5.27□□□□□ -1.57
Upf3bQ3ULL6 Gm19104-201ENSMUST00000198392 679 ntBASIC5.27□□□□□ -1.57
Upf3bQ3ULL6 Mir6994-201ENSMUST00000198985 73 ntBASIC5.27□□□□□ -1.57
Upf3bQ3ULL6 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC5.27□□□□□ -1.57
Upf3bQ3ULL6 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC5.27□□□□□ -1.57
Upf3bQ3ULL6 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Upf3bQ3ULL6 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC5.27□□□□□ -1.57
Upf3bQ3ULL6 AC131720.3-201ENSMUST00000219113 275 ntBASIC5.27□□□□□ -1.57
Upf3bQ3ULL6 AC140209.1-204ENSMUST00000226736 739 ntBASIC5.27□□□□□ -1.57
Upf3bQ3ULL6 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Upf3bQ3ULL6 Desi2-202ENSMUST00000069568 1193 ntBASIC5.27□□□□□ -1.57
Upf3bQ3ULL6 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Upf3bQ3ULL6 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC5.27□□□□□ -1.57
Upf3bQ3ULL6 Gm42598-201ENSMUST00000200110 2437 ntBASIC5.27□□□□□ -1.57
Upf3bQ3ULL6 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Upf3bQ3ULL6 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Upf3bQ3ULL6 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC5.27□□□□□ -1.57
Upf3bQ3ULL6 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Upf3bQ3ULL6 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Upf3bQ3ULL6 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Upf3bQ3ULL6 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Upf3bQ3ULL6 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC5.26□□□□□ -1.57
Upf3bQ3ULL6 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Upf3bQ3ULL6 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Upf3bQ3ULL6 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Upf3bQ3ULL6 Gm42869-201ENSMUST00000199953 2121 ntBASIC5.26□□□□□ -1.57
Upf3bQ3ULL6 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
Upf3bQ3ULL6 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC5.26□□□□□ -1.57
Upf3bQ3ULL6 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Upf3bQ3ULL6 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC5.26□□□□□ -1.57
Upf3bQ3ULL6 Gm25179-201ENSMUST00000122632 128 ntBASIC5.26□□□□□ -1.57
Upf3bQ3ULL6 Gm12854-201ENSMUST00000128518 297 ntBASIC5.26□□□□□ -1.57
Upf3bQ3ULL6 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC5.26□□□□□ -1.57
Upf3bQ3ULL6 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC5.26□□□□□ -1.57
Upf3bQ3ULL6 Gm23327-201ENSMUST00000157420 78 ntBASIC5.26□□□□□ -1.57
Upf3bQ3ULL6 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Upf3bQ3ULL6 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Upf3bQ3ULL6 Gm18350-201ENSMUST00000187395 955 ntBASIC5.26□□□□□ -1.57
Upf3bQ3ULL6 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC5.26□□□□□ -1.57
Upf3bQ3ULL6 Gm10292-202ENSMUST00000193165 585 ntBASIC5.26□□□□□ -1.57
Upf3bQ3ULL6 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC5.26□□□□□ -1.57
Upf3bQ3ULL6 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC5.26□□□□□ -1.57
Upf3bQ3ULL6 Gm43768-201ENSMUST00000198380 1258 ntBASIC5.26□□□□□ -1.57
Upf3bQ3ULL6 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC5.26□□□□□ -1.57
Upf3bQ3ULL6 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC5.26□□□□□ -1.57
Upf3bQ3ULL6 Gm18011-201ENSMUST00000203717 565 ntBASIC5.26□□□□□ -1.57
Upf3bQ3ULL6 Gm19065-202ENSMUST00000203910 1165 ntBASIC5.26□□□□□ -1.57
Upf3bQ3ULL6 Gm44648-201ENSMUST00000208267 329 ntBASIC5.26□□□□□ -1.57
Upf3bQ3ULL6 Gm18127-201ENSMUST00000208479 725 ntBASIC5.26□□□□□ -1.57
Upf3bQ3ULL6 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC5.26□□□□□ -1.57
Upf3bQ3ULL6 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC5.26□□□□□ -1.57
Upf3bQ3ULL6 Gm7665-201ENSMUST00000076710 297 ntBASIC5.26□□□□□ -1.57
Upf3bQ3ULL6 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Upf3bQ3ULL6 Gm25134-201ENSMUST00000082646 160 ntBASIC5.26□□□□□ -1.57
Upf3bQ3ULL6 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Upf3bQ3ULL6 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Upf3bQ3ULL6 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Upf3bQ3ULL6 Gm43266-201ENSMUST00000201049 1771 ntBASIC5.26□□□□□ -1.57
Upf3bQ3ULL6 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Upf3bQ3ULL6 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Upf3bQ3ULL6 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Upf3bQ3ULL6 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Upf3bQ3ULL6 Gm43312-201ENSMUST00000201655 2466 ntBASIC5.25□□□□□ -1.57
Upf3bQ3ULL6 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Upf3bQ3ULL6 Gm38243-201ENSMUST00000194737 1567 ntBASIC5.25□□□□□ -1.57
Upf3bQ3ULL6 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Upf3bQ3ULL6 Gm37180-201ENSMUST00000195335 2819 ntBASIC5.25□□□□□ -1.57
Upf3bQ3ULL6 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Upf3bQ3ULL6 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Upf3bQ3ULL6 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Upf3bQ3ULL6 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Upf3bQ3ULL6 Gm13195-201ENSMUST00000117229 261 ntBASIC5.25□□□□□ -1.57
Upf3bQ3ULL6 Gm14065-201ENSMUST00000120848 585 ntBASIC5.25□□□□□ -1.57
Upf3bQ3ULL6 Gm15838-201ENSMUST00000161575 180 ntBASIC5.25□□□□□ -1.57
Upf3bQ3ULL6 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC5.25□□□□□ -1.57
Upf3bQ3ULL6 Gm6647-201ENSMUST00000170514 641 ntBASIC5.25□□□□□ -1.57
Upf3bQ3ULL6 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Upf3bQ3ULL6 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Upf3bQ3ULL6 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC5.25□□□□□ -1.57
Upf3bQ3ULL6 Gm44330-201ENSMUST00000200106 143 ntBASIC5.25□□□□□ -1.57
Upf3bQ3ULL6 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC5.25□□□□□ -1.57
Upf3bQ3ULL6 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC5.25□□□□□ -1.57
Upf3bQ3ULL6 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC5.25□□□□□ -1.57
Upf3bQ3ULL6 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC5.25□□□□□ -1.57
Upf3bQ3ULL6 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Upf3bQ3ULL6 AC123658.1-201ENSMUST00000228364 867 ntBASIC5.25□□□□□ -1.57
Upf3bQ3ULL6 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Upf3bQ3ULL6 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Upf3bQ3ULL6 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Upf3bQ3ULL6 Snord15b-201ENSMUST00000083032 145 ntBASIC5.25□□□□□ -1.57
Upf3bQ3ULL6 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Upf3bQ3ULL6 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Upf3bQ3ULL6 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC5.25□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms