Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm43990-201ENSMUST00000203790 1691 ntBASIC4.59□□□□□ -1.68
Spg11Q3UHA3 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.68
Spg11Q3UHA3 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC4.58□□□□□ -1.68
Spg11Q3UHA3 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Spg11Q3UHA3 Gm23294-201ENSMUST00000104150 164 ntBASIC4.58□□□□□ -1.68
Spg11Q3UHA3 n-R5s98-201ENSMUST00000122549 119 ntBASIC4.58□□□□□ -1.68
Spg11Q3UHA3 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Spg11Q3UHA3 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Spg11Q3UHA3 Gm23164-201ENSMUST00000175084 111 ntBASIC4.58□□□□□ -1.68
Spg11Q3UHA3 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC4.58□□□□□ -1.68
Spg11Q3UHA3 Gm4734-201ENSMUST00000200117 777 ntBASIC4.58□□□□□ -1.68
Spg11Q3UHA3 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Spg11Q3UHA3 AC122035.2-201ENSMUST00000228698 462 ntBASIC4.58□□□□□ -1.68
Spg11Q3UHA3 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Spg11Q3UHA3 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Spg11Q3UHA3 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Spg11Q3UHA3 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC4.58□□□□□ -1.68
Spg11Q3UHA3 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Spg11Q3UHA3 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Spg11Q3UHA3 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Spg11Q3UHA3 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Spg11Q3UHA3 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Spg11Q3UHA3 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC4.58□□□□□ -1.68
Spg11Q3UHA3 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC4.58□□□□□ -1.68
Spg11Q3UHA3 Gm6542-201ENSMUST00000153606 772 ntBASIC4.58□□□□□ -1.68
Spg11Q3UHA3 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Spg11Q3UHA3 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Spg11Q3UHA3 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC4.58□□□□□ -1.68
Spg11Q3UHA3 Gm17956-201ENSMUST00000199931 838 ntBASIC4.58□□□□□ -1.68
Spg11Q3UHA3 Gm44243-201ENSMUST00000204323 692 ntBASIC4.58□□□□□ -1.68
Spg11Q3UHA3 Gm8556-201ENSMUST00000210437 664 ntBASIC4.58□□□□□ -1.68
Spg11Q3UHA3 AC125405.1-201ENSMUST00000226406 589 ntBASIC4.58□□□□□ -1.68
Spg11Q3UHA3 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Spg11Q3UHA3 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Spg11Q3UHA3 Gm4011-201ENSMUST00000174657 2555 ntBASIC4.58□□□□□ -1.68
Spg11Q3UHA3 Gm37541-201ENSMUST00000192464 2315 ntBASIC4.58□□□□□ -1.68
Spg11Q3UHA3 Gm45426-201ENSMUST00000209393 3672 ntBASIC4.58□□□□□ -1.68
Spg11Q3UHA3 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Spg11Q3UHA3 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC4.58□□□□□ -1.68
Spg11Q3UHA3 Gm43178-201ENSMUST00000197257 1386 ntBASIC4.58□□□□□ -1.68
Spg11Q3UHA3 Gm42616-201ENSMUST00000198989 4184 ntBASIC4.58□□□□□ -1.68
Spg11Q3UHA3 AC154227.1-201ENSMUST00000228809 2467 ntBASIC4.58□□□□□ -1.68
Spg11Q3UHA3 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Spg11Q3UHA3 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Spg11Q3UHA3 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Spg11Q3UHA3 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Spg11Q3UHA3 Fam35a-206ENSMUST00000228626 3100 ntBASIC4.58□□□□□ -1.68
Spg11Q3UHA3 Gm15583-201ENSMUST00000116191 3510 ntBASIC4.58□□□□□ -1.68
Spg11Q3UHA3 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC4.58□□□□□ -1.68
Spg11Q3UHA3 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Spg11Q3UHA3 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Spg11Q3UHA3 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
Spg11Q3UHA3 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC4.57□□□□□ -1.68
Spg11Q3UHA3 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC4.57□□□□□ -1.68
Spg11Q3UHA3 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Spg11Q3UHA3 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Spg11Q3UHA3 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Spg11Q3UHA3 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Spg11Q3UHA3 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Spg11Q3UHA3 Gm44648-201ENSMUST00000208267 329 ntBASIC4.57□□□□□ -1.68
Spg11Q3UHA3 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Spg11Q3UHA3 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC4.57□□□□□ -1.68
Spg11Q3UHA3 Gm25260-201ENSMUST00000083053 134 ntBASIC4.57□□□□□ -1.68
Spg11Q3UHA3 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Spg11Q3UHA3 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Spg11Q3UHA3 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC4.57□□□□□ -1.68
Spg11Q3UHA3 Gm43891-201ENSMUST00000205132 3112 ntBASIC4.57□□□□□ -1.68
Spg11Q3UHA3 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
Spg11Q3UHA3 Gm42535-201ENSMUST00000197312 1399 ntBASIC4.57□□□□□ -1.68
Spg11Q3UHA3 Gm7529-201ENSMUST00000213753 1897 ntBASIC4.57□□□□□ -1.68
Spg11Q3UHA3 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Spg11Q3UHA3 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC4.57□□□□□ -1.68
Spg11Q3UHA3 Gm38189-201ENSMUST00000194495 1457 ntBASIC4.57□□□□□ -1.68
Spg11Q3UHA3 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC4.57□□□□□ -1.68
Spg11Q3UHA3 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC4.57□□□□□ -1.68
Spg11Q3UHA3 Gm38263-201ENSMUST00000195879 3059 ntBASIC4.57□□□□□ -1.68
Spg11Q3UHA3 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Spg11Q3UHA3 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Spg11Q3UHA3 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Spg11Q3UHA3 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Spg11Q3UHA3 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Spg11Q3UHA3 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
Spg11Q3UHA3 Gm11245-201ENSMUST00000119419 1037 ntBASIC4.57□□□□□ -1.68
Spg11Q3UHA3 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Spg11Q3UHA3 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC4.57□□□□□ -1.68
Spg11Q3UHA3 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC4.57□□□□□ -1.68
Spg11Q3UHA3 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC4.57□□□□□ -1.68
Spg11Q3UHA3 Gm42830-201ENSMUST00000196642 313 ntBASIC4.57□□□□□ -1.68
Spg11Q3UHA3 Gm43232-201ENSMUST00000201346 364 ntBASIC4.57□□□□□ -1.68
Spg11Q3UHA3 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC4.57□□□□□ -1.68
Spg11Q3UHA3 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Spg11Q3UHA3 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC4.57□□□□□ -1.68
Spg11Q3UHA3 Gm20789-201ENSMUST00000221002 4195 ntBASIC4.57□□□□□ -1.68
Spg11Q3UHA3 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC4.57□□□□□ -1.68
Spg11Q3UHA3 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Spg11Q3UHA3 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Spg11Q3UHA3 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Spg11Q3UHA3 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Spg11Q3UHA3 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
Spg11Q3UHA3 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms