Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Usp39Q3TIX9 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
Usp39Q3TIX9 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Usp39Q3TIX9 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Usp39Q3TIX9 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Usp39Q3TIX9 Gm12077-201ENSMUST00000117049 364 ntBASIC5.54□□□□□ -1.52
Usp39Q3TIX9 Gm14879-201ENSMUST00000117308 507 ntBASIC5.54□□□□□ -1.52
Usp39Q3TIX9 Gm15923-201ENSMUST00000119300 1169 ntBASIC5.54□□□□□ -1.52
Usp39Q3TIX9 Gm2318-201ENSMUST00000119623 639 ntBASIC5.54□□□□□ -1.52
Usp39Q3TIX9 Defa-ps11-201ENSMUST00000119719 299 ntBASIC5.54□□□□□ -1.52
Usp39Q3TIX9 Gm14360-201ENSMUST00000120670 393 ntBASIC5.54□□□□□ -1.52
Usp39Q3TIX9 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC5.54□□□□□ -1.52
Usp39Q3TIX9 Gm24741-201ENSMUST00000158857 106 ntBASIC5.54□□□□□ -1.52
Usp39Q3TIX9 Gm15970-201ENSMUST00000160623 834 ntBASIC5.54□□□□□ -1.52
Usp39Q3TIX9 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Usp39Q3TIX9 Gm7438-201ENSMUST00000177664 639 ntBASIC5.54□□□□□ -1.52
Usp39Q3TIX9 Gm7408-201ENSMUST00000178014 639 ntBASIC5.54□□□□□ -1.52
Usp39Q3TIX9 Gm7386-201ENSMUST00000178020 639 ntBASIC5.54□□□□□ -1.52
Usp39Q3TIX9 Gm3657-201ENSMUST00000178170 639 ntBASIC5.54□□□□□ -1.52
Usp39Q3TIX9 Gm7415-201ENSMUST00000178205 639 ntBASIC5.54□□□□□ -1.52
Usp39Q3TIX9 Gm21909-201ENSMUST00000178260 439 ntBASIC5.54□□□□□ -1.52
Usp39Q3TIX9 Gm7398-201ENSMUST00000178589 639 ntBASIC5.54□□□□□ -1.52
Usp39Q3TIX9 Gm7391-201ENSMUST00000178680 639 ntBASIC5.54□□□□□ -1.52
Usp39Q3TIX9 Gm7375-201ENSMUST00000179232 639 ntBASIC5.54□□□□□ -1.52
Usp39Q3TIX9 Gm5473-201ENSMUST00000179326 642 ntBASIC5.54□□□□□ -1.52
Usp39Q3TIX9 Gm3681-201ENSMUST00000179940 639 ntBASIC5.54□□□□□ -1.52
Usp39Q3TIX9 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Usp39Q3TIX9 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Usp39Q3TIX9 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Usp39Q3TIX9 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Usp39Q3TIX9 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Usp39Q3TIX9 Gm21654-201ENSMUST00000188086 691 ntBASIC5.54□□□□□ -1.52
Usp39Q3TIX9 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC5.54□□□□□ -1.52
Usp39Q3TIX9 Gm29525-201ENSMUST00000189844 699 ntBASIC5.54□□□□□ -1.52
Usp39Q3TIX9 Gm29523-201ENSMUST00000191415 699 ntBASIC5.54□□□□□ -1.52
Usp39Q3TIX9 Gm38185-201ENSMUST00000193195 694 ntBASIC5.54□□□□□ -1.52
Usp39Q3TIX9 Gm38146-201ENSMUST00000194121 1293 ntBASIC5.54□□□□□ -1.52
Usp39Q3TIX9 AC157822.1-201ENSMUST00000196643 80 ntBASIC5.54□□□□□ -1.52
Usp39Q3TIX9 Gm2287-202ENSMUST00000199619 1000 ntBASIC5.54□□□□□ -1.52
Usp39Q3TIX9 Gm4742-201ENSMUST00000200261 771 ntBASIC5.54□□□□□ -1.52
Usp39Q3TIX9 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC5.54□□□□□ -1.52
Usp39Q3TIX9 Gm5990-201ENSMUST00000203126 746 ntBASIC5.54□□□□□ -1.52
Usp39Q3TIX9 Gm7890-201ENSMUST00000204877 601 ntBASIC5.54□□□□□ -1.52
Usp39Q3TIX9 Gm44539-201ENSMUST00000206010 238 ntBASIC5.54□□□□□ -1.52
Usp39Q3TIX9 Gm18205-201ENSMUST00000209215 841 ntBASIC5.54□□□□□ -1.52
Usp39Q3TIX9 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC5.54□□□□□ -1.52
Usp39Q3TIX9 AC123832.2-201ENSMUST00000215151 129 ntBASIC5.54□□□□□ -1.52
Usp39Q3TIX9 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Usp39Q3TIX9 AC166323.1-201ENSMUST00000217756 367 ntBASIC5.54□□□□□ -1.52
Usp39Q3TIX9 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC5.54□□□□□ -1.52
Usp39Q3TIX9 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC5.54□□□□□ -1.52
Usp39Q3TIX9 AC153357.1-201ENSMUST00000219190 482 ntBASIC5.54□□□□□ -1.52
Usp39Q3TIX9 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC5.54□□□□□ -1.52
Usp39Q3TIX9 AC141425.1-201ENSMUST00000224989 265 ntBASIC5.54□□□□□ -1.52
Usp39Q3TIX9 AC133203.2-201ENSMUST00000226709 464 ntBASIC5.54□□□□□ -1.52
Usp39Q3TIX9 Anxa13-202ENSMUST00000227274 1201 ntBASIC5.54□□□□□ -1.52
Usp39Q3TIX9 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Usp39Q3TIX9 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Usp39Q3TIX9 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Usp39Q3TIX9 mt-Td-201ENSMUST00000082404 70 ntBASIC5.54□□□□□ -1.52
Usp39Q3TIX9 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Usp39Q3TIX9 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Usp39Q3TIX9 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC5.54□□□□□ -1.52
Usp39Q3TIX9 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Usp39Q3TIX9 Gm37482-201ENSMUST00000194899 2791 ntBASIC5.54□□□□□ -1.52
Usp39Q3TIX9 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Usp39Q3TIX9 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Usp39Q3TIX9 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Usp39Q3TIX9 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Usp39Q3TIX9 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Usp39Q3TIX9 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
Usp39Q3TIX9 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
Usp39Q3TIX9 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Usp39Q3TIX9 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC5.53□□□□□ -1.52
Usp39Q3TIX9 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
Usp39Q3TIX9 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
Usp39Q3TIX9 Gm19176-201ENSMUST00000222149 1831 ntBASIC5.53□□□□□ -1.52
Usp39Q3TIX9 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Usp39Q3TIX9 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Usp39Q3TIX9 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Usp39Q3TIX9 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Usp39Q3TIX9 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Usp39Q3TIX9 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Usp39Q3TIX9 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Usp39Q3TIX9 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC5.53□□□□□ -1.52
Usp39Q3TIX9 Gm13451-201ENSMUST00000117649 592 ntBASIC5.53□□□□□ -1.52
Usp39Q3TIX9 Gm11984-201ENSMUST00000118142 766 ntBASIC5.53□□□□□ -1.52
Usp39Q3TIX9 Gm12889-201ENSMUST00000118684 241 ntBASIC5.53□□□□□ -1.52
Usp39Q3TIX9 Gm14783-201ENSMUST00000118900 663 ntBASIC5.53□□□□□ -1.52
Usp39Q3TIX9 Gm15971-201ENSMUST00000119372 211 ntBASIC5.53□□□□□ -1.52
Usp39Q3TIX9 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Usp39Q3TIX9 Gm13080-201ENSMUST00000120556 420 ntBASIC5.53□□□□□ -1.52
Usp39Q3TIX9 Gm14679-201ENSMUST00000121536 722 ntBASIC5.53□□□□□ -1.52
Usp39Q3TIX9 Gm12819-201ENSMUST00000122223 629 ntBASIC5.53□□□□□ -1.52
Usp39Q3TIX9 Gm12488-201ENSMUST00000122449 499 ntBASIC5.53□□□□□ -1.52
Usp39Q3TIX9 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Usp39Q3TIX9 Mup-ps4-201ENSMUST00000151005 539 ntBASIC5.53□□□□□ -1.52
Usp39Q3TIX9 Gm25459-201ENSMUST00000157953 114 ntBASIC5.53□□□□□ -1.52
Usp39Q3TIX9 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Usp39Q3TIX9 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC5.53□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms