Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Sox9Q04887 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC6.08□□□□□ -1.44
Sox9Q04887 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Sox9Q04887 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC6.08□□□□□ -1.44
Sox9Q04887 S100a11-ps-201ENSMUST00000181735 306 ntBASIC6.08□□□□□ -1.44
Sox9Q04887 Mir7087-201ENSMUST00000184840 70 ntBASIC6.08□□□□□ -1.44
Sox9Q04887 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC6.08□□□□□ -1.44
Sox9Q04887 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Sox9Q04887 Gm17952-201ENSMUST00000193914 747 ntBASIC6.08□□□□□ -1.44
Sox9Q04887 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Sox9Q04887 Gm5554-201ENSMUST00000199726 1206 ntBASIC6.08□□□□□ -1.44
Sox9Q04887 Gm45658-201ENSMUST00000209197 580 ntBASIC6.08□□□□□ -1.44
Sox9Q04887 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC6.08□□□□□ -1.44
Sox9Q04887 AC166830.1-201ENSMUST00000224201 533 ntBASIC6.08□□□□□ -1.44
Sox9Q04887 AC154747.1-201ENSMUST00000225265 239 ntBASIC6.08□□□□□ -1.44
Sox9Q04887 CT009550.5-201ENSMUST00000226286 382 ntBASIC6.08□□□□□ -1.44
Sox9Q04887 AC162857.1-201ENSMUST00000226614 400 ntBASIC6.08□□□□□ -1.44
Sox9Q04887 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sox9Q04887 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Sox9Q04887 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Sox9Q04887 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Sox9Q04887 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Sox9Q04887 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sox9Q04887 Gm43771-201ENSMUST00000202931 1578 ntBASIC6.08□□□□□ -1.44
Sox9Q04887 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Sox9Q04887 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sox9Q04887 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Sox9Q04887 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Sox9Q04887 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sox9Q04887 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sox9Q04887 Gm42492-201ENSMUST00000195780 2915 ntBASIC6.08□□□□□ -1.44
Sox9Q04887 Gm43088-201ENSMUST00000197530 2347 ntBASIC6.08□□□□□ -1.44
Sox9Q04887 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sox9Q04887 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sox9Q04887 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Sox9Q04887 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC6.07□□□□□ -1.44
Sox9Q04887 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sox9Q04887 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sox9Q04887 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
Sox9Q04887 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sox9Q04887 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sox9Q04887 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC6.07□□□□□ -1.44
Sox9Q04887 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC6.07□□□□□ -1.44
Sox9Q04887 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Sox9Q04887 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sox9Q04887 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sox9Q04887 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC6.07□□□□□ -1.44
Sox9Q04887 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC6.07□□□□□ -1.44
Sox9Q04887 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Sox9Q04887 Gm13770-201ENSMUST00000117149 305 ntBASIC6.07□□□□□ -1.44
Sox9Q04887 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC6.07□□□□□ -1.44
Sox9Q04887 Gm15021-201ENSMUST00000117832 742 ntBASIC6.07□□□□□ -1.44
Sox9Q04887 Gm13788-201ENSMUST00000120767 601 ntBASIC6.07□□□□□ -1.44
Sox9Q04887 Gm14876-201ENSMUST00000120795 327 ntBASIC6.07□□□□□ -1.44
Sox9Q04887 Gm14848-201ENSMUST00000121850 467 ntBASIC6.07□□□□□ -1.44
Sox9Q04887 n-R5s48-201ENSMUST00000122482 110 ntBASIC6.07□□□□□ -1.44
Sox9Q04887 Gm22726-201ENSMUST00000158089 179 ntBASIC6.07□□□□□ -1.44
Sox9Q04887 Gm23774-201ENSMUST00000158990 131 ntBASIC6.07□□□□□ -1.44
Sox9Q04887 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC6.07□□□□□ -1.44
Sox9Q04887 Gm25598-201ENSMUST00000179031 107 ntBASIC6.07□□□□□ -1.44
Sox9Q04887 Gm25942-201ENSMUST00000180080 110 ntBASIC6.07□□□□□ -1.44
Sox9Q04887 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Sox9Q04887 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC6.07□□□□□ -1.44
Sox9Q04887 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC6.07□□□□□ -1.44
Sox9Q04887 Gm18340-201ENSMUST00000196342 609 ntBASIC6.07□□□□□ -1.44
Sox9Q04887 Gm43744-201ENSMUST00000196387 688 ntBASIC6.07□□□□□ -1.44
Sox9Q04887 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sox9Q04887 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Sox9Q04887 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC6.07□□□□□ -1.44
Sox9Q04887 AC166263.1-201ENSMUST00000218586 238 ntBASIC6.07□□□□□ -1.44
Sox9Q04887 AC162467.1-201ENSMUST00000220254 621 ntBASIC6.07□□□□□ -1.44
Sox9Q04887 AC160114.1-201ENSMUST00000221930 365 ntBASIC6.07□□□□□ -1.44
Sox9Q04887 AC129085.4-201ENSMUST00000224536 570 ntBASIC6.07□□□□□ -1.44
Sox9Q04887 AC112972.1-201ENSMUST00000227329 365 ntBASIC6.07□□□□□ -1.44
Sox9Q04887 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Sox9Q04887 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Sox9Q04887 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sox9Q04887 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Sox9Q04887 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
Sox9Q04887 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Sox9Q04887 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC6.07□□□□□ -1.44
Sox9Q04887 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
Sox9Q04887 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sox9Q04887 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Sox9Q04887 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Sox9Q04887 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sox9Q04887 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Sox9Q04887 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Sox9Q04887 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Sox9Q04887 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Sox9Q04887 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Sox9Q04887 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Sox9Q04887 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Sox9Q04887 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Sox9Q04887 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Sox9Q04887 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
Sox9Q04887 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Sox9Q04887 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sox9Q04887 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Sox9Q04887 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 103.2 ms