Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Igkv13-87-201ENSMUST00000114214 286 ntBASIC5.3□□□□□ -1.56
Col8a1Q00780 Gm15175-201ENSMUST00000117629 132 ntBASIC5.3□□□□□ -1.56
Col8a1Q00780 Gm11843-201ENSMUST00000118984 425 ntBASIC5.3□□□□□ -1.56
Col8a1Q00780 Gm4911-201ENSMUST00000119388 945 ntBASIC5.3□□□□□ -1.56
Col8a1Q00780 Gm7916-201ENSMUST00000120325 456 ntBASIC5.3□□□□□ -1.56
Col8a1Q00780 Llph-ps1-201ENSMUST00000121281 390 ntBASIC5.3□□□□□ -1.56
Col8a1Q00780 Gm11894-201ENSMUST00000121579 328 ntBASIC5.3□□□□□ -1.56
Col8a1Q00780 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Col8a1Q00780 Gm15367-201ENSMUST00000122398 1016 ntBASIC5.3□□□□□ -1.56
Col8a1Q00780 Mup-ps12-201ENSMUST00000126217 549 ntBASIC5.3□□□□□ -1.56
Col8a1Q00780 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC5.3□□□□□ -1.56
Col8a1Q00780 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC5.3□□□□□ -1.56
Col8a1Q00780 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC5.3□□□□□ -1.56
Col8a1Q00780 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Col8a1Q00780 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC5.3□□□□□ -1.56
Col8a1Q00780 Gm3053-201ENSMUST00000161709 616 ntBASIC5.3□□□□□ -1.56
Col8a1Q00780 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Col8a1Q00780 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
Col8a1Q00780 Gm21772-201ENSMUST00000169213 478 ntBASIC5.3□□□□□ -1.56
Col8a1Q00780 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Col8a1Q00780 Gm17126-201ENSMUST00000172276 523 ntBASIC5.3□□□□□ -1.56
Col8a1Q00780 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Col8a1Q00780 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC5.3□□□□□ -1.56
Col8a1Q00780 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Col8a1Q00780 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC5.3□□□□□ -1.56
Col8a1Q00780 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC5.3□□□□□ -1.56
Col8a1Q00780 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC5.3□□□□□ -1.56
Col8a1Q00780 Gm6717-201ENSMUST00000185549 838 ntBASIC5.3□□□□□ -1.56
Col8a1Q00780 Gm8392-201ENSMUST00000185647 835 ntBASIC5.3□□□□□ -1.56
Col8a1Q00780 Gm18900-201ENSMUST00000193218 584 ntBASIC5.3□□□□□ -1.56
Col8a1Q00780 Gm2622-201ENSMUST00000200018 471 ntBASIC5.3□□□□□ -1.56
Col8a1Q00780 Gm44330-201ENSMUST00000200106 143 ntBASIC5.3□□□□□ -1.56
Col8a1Q00780 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Col8a1Q00780 Gm18672-201ENSMUST00000208035 270 ntBASIC5.3□□□□□ -1.56
Col8a1Q00780 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Col8a1Q00780 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col8a1Q00780 Gm21041-201ENSMUST00000214829 823 ntBASIC5.3□□□□□ -1.56
Col8a1Q00780 AC073947.3-201ENSMUST00000215576 766 ntBASIC5.3□□□□□ -1.56
Col8a1Q00780 Gm18557-201ENSMUST00000218710 433 ntBASIC5.3□□□□□ -1.56
Col8a1Q00780 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC5.3□□□□□ -1.56
Col8a1Q00780 AC127279.1-201ENSMUST00000220140 637 ntBASIC5.3□□□□□ -1.56
Col8a1Q00780 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC5.3□□□□□ -1.56
Col8a1Q00780 AC122295.1-201ENSMUST00000223476 388 ntBASIC5.3□□□□□ -1.56
Col8a1Q00780 Ap3m1-208ENSMUST00000224016 764 ntBASIC5.3□□□□□ -1.56
Col8a1Q00780 AC154767.2-201ENSMUST00000224584 414 ntBASIC5.3□□□□□ -1.56
Col8a1Q00780 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC5.3□□□□□ -1.56
Col8a1Q00780 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Col8a1Q00780 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC5.3□□□□□ -1.56
Col8a1Q00780 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Col8a1Q00780 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Col8a1Q00780 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC5.3□□□□□ -1.56
Col8a1Q00780 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC5.3□□□□□ -1.56
Col8a1Q00780 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col8a1Q00780 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Col8a1Q00780 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col8a1Q00780 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC5.3□□□□□ -1.56
Col8a1Q00780 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col8a1Q00780 Gm10723-201ENSMUST00000195366 6918 ntBASIC5.3□□□□□ -1.56
Col8a1Q00780 AC153971.1-201ENSMUST00000215097 3811 ntBASIC5.3□□□□□ -1.56
Col8a1Q00780 Gm42440-201ENSMUST00000197906 2284 ntBASIC5.3□□□□□ -1.56
Col8a1Q00780 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Col8a1Q00780 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Col8a1Q00780 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Col8a1Q00780 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Col8a1Q00780 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col8a1Q00780 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col8a1Q00780 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC5.29□□□□□ -1.56
Col8a1Q00780 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Col8a1Q00780 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col8a1Q00780 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm8734-201ENSMUST00000211669 1312 ntBASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Col8a1Q00780 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC5.29□□□□□ -1.56
Col8a1Q00780 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col8a1Q00780 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm22592-201ENSMUST00000104242 131 ntBASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm24989-201ENSMUST00000104461 88 ntBASIC5.29□□□□□ -1.56
Col8a1Q00780 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm22103-201ENSMUST00000116733 121 ntBASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm26475-201ENSMUST00000116769 121 ntBASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm23620-201ENSMUST00000116812 121 ntBASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm25042-201ENSMUST00000116856 121 ntBASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm25540-201ENSMUST00000116880 121 ntBASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm16205-201ENSMUST00000117720 1027 ntBASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm14512-201ENSMUST00000117924 230 ntBASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm15060-201ENSMUST00000119550 948 ntBASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm12229-201ENSMUST00000120487 468 ntBASIC5.29□□□□□ -1.56
Col8a1Q00780 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm4789-201ENSMUST00000121708 1216 ntBASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm13471-201ENSMUST00000122057 433 ntBASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm14349-201ENSMUST00000137155 902 ntBASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm23435-201ENSMUST00000157183 156 ntBASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm23205-201ENSMUST00000158671 103 ntBASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm15914-201ENSMUST00000161922 309 ntBASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm3111-201ENSMUST00000167426 490 ntBASIC5.29□□□□□ -1.56
Col8a1Q00780 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC5.29□□□□□ -1.56
Col8a1Q00780 Gm25397-201ENSMUST00000176951 92 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms