Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm43024-201ENSMUST00000196770 4352 ntBASIC4.35□□□□□ -1.71
Nkx3-1P97436 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC4.35□□□□□ -1.71
Nkx3-1P97436 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Nkx3-1P97436 Gm37781-201ENSMUST00000194773 3218 ntBASIC4.35□□□□□ -1.71
Nkx3-1P97436 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Nkx3-1P97436 Gm44668-201ENSMUST00000207911 3265 ntBASIC4.35□□□□□ -1.71
Nkx3-1P97436 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC4.35□□□□□ -1.71
Nkx3-1P97436 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Nkx3-1P97436 Gm44518-201ENSMUST00000208080 4370 ntBASIC4.35□□□□□ -1.71
Nkx3-1P97436 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Nkx3-1P97436 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Nkx3-1P97436 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC4.35□□□□□ -1.71
Nkx3-1P97436 Gm11486-201ENSMUST00000107322 478 ntBASIC4.35□□□□□ -1.71
Nkx3-1P97436 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Nkx3-1P97436 Gm12237-201ENSMUST00000120158 470 ntBASIC4.35□□□□□ -1.71
Nkx3-1P97436 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Nkx3-1P97436 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC4.35□□□□□ -1.71
Nkx3-1P97436 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Nkx3-1P97436 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Nkx3-1P97436 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC4.35□□□□□ -1.71
Nkx3-1P97436 Gm23673-201ENSMUST00000157474 298 ntBASIC4.35□□□□□ -1.71
Nkx3-1P97436 Mir1947-201ENSMUST00000158235 85 ntBASIC4.35□□□□□ -1.71
Nkx3-1P97436 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC4.35□□□□□ -1.71
Nkx3-1P97436 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC4.35□□□□□ -1.71
Nkx3-1P97436 Gm9442-201ENSMUST00000194242 319 ntBASIC4.35□□□□□ -1.71
Nkx3-1P97436 Gm42428-201ENSMUST00000198677 302 ntBASIC4.35□□□□□ -1.71
Nkx3-1P97436 Gm43309-201ENSMUST00000200837 458 ntBASIC4.35□□□□□ -1.71
Nkx3-1P97436 Gm18100-201ENSMUST00000200897 452 ntBASIC4.35□□□□□ -1.71
Nkx3-1P97436 Gm6719-201ENSMUST00000202067 335 ntBASIC4.35□□□□□ -1.71
Nkx3-1P97436 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC4.35□□□□□ -1.71
Nkx3-1P97436 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC4.35□□□□□ -1.71
Nkx3-1P97436 AC153954.2-201ENSMUST00000213811 287 ntBASIC4.35□□□□□ -1.71
Nkx3-1P97436 AC158633.1-201ENSMUST00000219892 649 ntBASIC4.35□□□□□ -1.71
Nkx3-1P97436 CT030242.3-201ENSMUST00000221231 581 ntBASIC4.35□□□□□ -1.71
Nkx3-1P97436 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC4.35□□□□□ -1.71
Nkx3-1P97436 AC138765.1-201ENSMUST00000228657 385 ntBASIC4.35□□□□□ -1.71
Nkx3-1P97436 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Nkx3-1P97436 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
Nkx3-1P97436 Gm36931-201ENSMUST00000192997 4801 ntBASIC4.35□□□□□ -1.71
Nkx3-1P97436 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Nkx3-1P97436 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Nkx3-1P97436 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC4.35□□□□□ -1.71
Nkx3-1P97436 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Nkx3-1P97436 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Nkx3-1P97436 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC4.35□□□□□ -1.71
Nkx3-1P97436 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Nkx3-1P97436 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Nkx3-1P97436 Gm10727-201ENSMUST00000197107 1602 ntBASIC4.35□□□□□ -1.71
Nkx3-1P97436 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC4.35□□□□□ -1.71
Nkx3-1P97436 Gm44250-201ENSMUST00000203092 4229 ntBASIC4.35□□□□□ -1.71
Nkx3-1P97436 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Nkx3-1P97436 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Nkx3-1P97436 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Nkx3-1P97436 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Nkx3-1P97436 Gm42598-201ENSMUST00000200110 2437 ntBASIC4.34□□□□□ -1.71
Nkx3-1P97436 Gm43784-201ENSMUST00000202922 2436 ntBASIC4.34□□□□□ -1.71
Nkx3-1P97436 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.71
Nkx3-1P97436 Gm43283-201ENSMUST00000199138 2548 ntBASIC4.34□□□□□ -1.71
Nkx3-1P97436 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Nkx3-1P97436 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC4.34□□□□□ -1.71
Nkx3-1P97436 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Nkx3-1P97436 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
Nkx3-1P97436 Gm19552-201ENSMUST00000194744 2833 ntBASIC4.34□□□□□ -1.71
Nkx3-1P97436 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Nkx3-1P97436 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Nkx3-1P97436 Gm37779-201ENSMUST00000194221 3380 ntBASIC4.34□□□□□ -1.71
Nkx3-1P97436 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC4.34□□□□□ -1.71
Nkx3-1P97436 Gm14995-201ENSMUST00000117135 391 ntBASIC4.34□□□□□ -1.71
Nkx3-1P97436 Gm16394-201ENSMUST00000117289 675 ntBASIC4.34□□□□□ -1.71
Nkx3-1P97436 Gm12189-201ENSMUST00000119779 912 ntBASIC4.34□□□□□ -1.71
Nkx3-1P97436 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Nkx3-1P97436 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Nkx3-1P97436 Gm22726-201ENSMUST00000158089 179 ntBASIC4.34□□□□□ -1.71
Nkx3-1P97436 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Nkx3-1P97436 Gm9294-201ENSMUST00000165198 789 ntBASIC4.34□□□□□ -1.71
Nkx3-1P97436 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Nkx3-1P97436 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Nkx3-1P97436 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Nkx3-1P97436 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Nkx3-1P97436 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Nkx3-1P97436 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Nkx3-1P97436 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Nkx3-1P97436 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Nkx3-1P97436 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Nkx3-1P97436 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Nkx3-1P97436 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC4.34□□□□□ -1.71
Nkx3-1P97436 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC4.34□□□□□ -1.71
Nkx3-1P97436 Gm26950-201ENSMUST00000182734 498 ntBASIC4.34□□□□□ -1.71
Nkx3-1P97436 Mir6410-201ENSMUST00000184204 104 ntBASIC4.34□□□□□ -1.71
Nkx3-1P97436 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Nkx3-1P97436 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Nkx3-1P97436 Gm23925-202ENSMUST00000188429 132 ntBASIC4.34□□□□□ -1.71
Nkx3-1P97436 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC4.34□□□□□ -1.71
Nkx3-1P97436 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC4.34□□□□□ -1.71
Nkx3-1P97436 Gm20056-201ENSMUST00000194813 519 ntBASIC4.34□□□□□ -1.71
Nkx3-1P97436 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC4.34□□□□□ -1.71
Nkx3-1P97436 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC4.34□□□□□ -1.71
Nkx3-1P97436 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC4.34□□□□□ -1.71
Nkx3-1P97436 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Nkx3-1P97436 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms