Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Mir5128-201ENSMUST00000175217 84 ntBASIC4.88□□□□□ -1.63
Sox3P53784 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Sox3P53784 Gm27611-201ENSMUST00000184690 108 ntBASIC4.88□□□□□ -1.63
Sox3P53784 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC4.88□□□□□ -1.63
Sox3P53784 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Sox3P53784 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC4.88□□□□□ -1.63
Sox3P53784 Gm37492-201ENSMUST00000191948 376 ntBASIC4.88□□□□□ -1.63
Sox3P53784 Gm42542-201ENSMUST00000197978 268 ntBASIC4.88□□□□□ -1.63
Sox3P53784 Gm8911-201ENSMUST00000213986 652 ntBASIC4.88□□□□□ -1.63
Sox3P53784 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC4.88□□□□□ -1.63
Sox3P53784 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Sox3P53784 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Sox3P53784 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Sox3P53784 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
Sox3P53784 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Sox3P53784 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
Sox3P53784 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC4.88□□□□□ -1.63
Sox3P53784 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Sox3P53784 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Sox3P53784 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Sox3P53784 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
Sox3P53784 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Sox3P53784 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC4.87□□□□□ -1.63
Sox3P53784 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Sox3P53784 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Sox3P53784 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Sox3P53784 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC4.87□□□□□ -1.63
Sox3P53784 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Sox3P53784 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC4.87□□□□□ -1.63
Sox3P53784 Gm15074-201ENSMUST00000117603 936 ntBASIC4.87□□□□□ -1.63
Sox3P53784 Gm15297-201ENSMUST00000117795 290 ntBASIC4.87□□□□□ -1.63
Sox3P53784 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Sox3P53784 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Sox3P53784 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Sox3P53784 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC4.87□□□□□ -1.63
Sox3P53784 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Sox3P53784 Gm5066-201ENSMUST00000188479 822 ntBASIC4.87□□□□□ -1.63
Sox3P53784 Gm37272-201ENSMUST00000193401 488 ntBASIC4.87□□□□□ -1.63
Sox3P53784 Gm44757-201ENSMUST00000206373 157 ntBASIC4.87□□□□□ -1.63
Sox3P53784 Gm45209-201ENSMUST00000207122 353 ntBASIC4.87□□□□□ -1.63
Sox3P53784 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC4.87□□□□□ -1.63
Sox3P53784 CT025665.1-201ENSMUST00000215251 1199 ntBASIC4.87□□□□□ -1.63
Sox3P53784 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC4.87□□□□□ -1.63
Sox3P53784 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC4.87□□□□□ -1.63
Sox3P53784 Gm46327-201ENSMUST00000218240 365 ntBASIC4.87□□□□□ -1.63
Sox3P53784 AC122295.1-201ENSMUST00000223476 388 ntBASIC4.87□□□□□ -1.63
Sox3P53784 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Sox3P53784 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC4.87□□□□□ -1.63
Sox3P53784 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Sox3P53784 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Sox3P53784 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Sox3P53784 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Sox3P53784 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Sox3P53784 n-R5s62-201ENSMUST00000082780 96 ntBASIC4.87□□□□□ -1.63
Sox3P53784 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Sox3P53784 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Sox3P53784 AC158982.1-205ENSMUST00000227339 1876 ntBASIC4.87□□□□□ -1.63
Sox3P53784 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
Sox3P53784 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Sox3P53784 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC4.87□□□□□ -1.63
Sox3P53784 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Sox3P53784 Gm3962-201ENSMUST00000173027 2587 ntBASIC4.87□□□□□ -1.63
Sox3P53784 Gm44801-201ENSMUST00000207644 2060 ntBASIC4.87□□□□□ -1.63
Sox3P53784 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Sox3P53784 Gm17101-201ENSMUST00000169520 1588 ntBASIC4.87□□□□□ -1.63
Sox3P53784 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Sox3P53784 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Sox3P53784 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
Sox3P53784 Zscan4a-201ENSMUST00000210573 2279 ntBASIC4.86□□□□□ -1.63
Sox3P53784 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Sox3P53784 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
Sox3P53784 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Sox3P53784 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Sox3P53784 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Sox3P53784 BC055308-201ENSMUST00000193380 2538 ntBASIC4.86□□□□□ -1.63
Sox3P53784 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Sox3P53784 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Sox3P53784 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Sox3P53784 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Sox3P53784 Gm25096-201ENSMUST00000104043 129 ntBASIC4.86□□□□□ -1.63
Sox3P53784 Snord66-201ENSMUST00000104051 75 ntBASIC4.86□□□□□ -1.63
Sox3P53784 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Sox3P53784 Mup-ps18-201ENSMUST00000120145 531 ntBASIC4.86□□□□□ -1.63
Sox3P53784 Gm14037-201ENSMUST00000120576 313 ntBASIC4.86□□□□□ -1.63
Sox3P53784 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Sox3P53784 Gm11200-201ENSMUST00000121698 448 ntBASIC4.86□□□□□ -1.63
Sox3P53784 Gm25292-201ENSMUST00000122797 322 ntBASIC4.86□□□□□ -1.63
Sox3P53784 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Sox3P53784 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Sox3P53784 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Sox3P53784 Gm20701-201ENSMUST00000176082 347 ntBASIC4.86□□□□□ -1.63
Sox3P53784 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Sox3P53784 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC4.86□□□□□ -1.63
Sox3P53784 Mir3473f-201ENSMUST00000183743 136 ntBASIC4.86□□□□□ -1.63
Sox3P53784 Gm27690-201ENSMUST00000184596 126 ntBASIC4.86□□□□□ -1.63
Sox3P53784 Gm5511-201ENSMUST00000189380 802 ntBASIC4.86□□□□□ -1.63
Sox3P53784 Ighv6-2-201ENSMUST00000192430 295 ntBASIC4.86□□□□□ -1.63
Sox3P53784 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC4.86□□□□□ -1.63
Sox3P53784 Gm44623-201ENSMUST00000207934 434 ntBASIC4.86□□□□□ -1.63
Sox3P53784 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms